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Mathieu Fourment
Mathieu Fourment
Verified email at uts.edu.au - Homepage
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Year
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ...
PLoS computational biology 15 (4), e1006650, 2019
27192019
Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis
DM Wagner, J Klunk, M Harbeck, A Devault, N Waglechner, JW Sahl, ...
The Lancet infectious diseases 14 (4), 319-326, 2014
5522014
A random effects branch-site model for detecting episodic diversifying selection
SL Kosakovsky Pond, B Murrell, M Fourment, SDW Frost, W Delport, ...
Molecular biology and evolution 28 (11), 3033-3043, 2011
4542011
Genome-scale rates of evolutionary change in bacteria
S Duchêne, KE Holt, FX Weill, S Le Hello, J Hawkey, DJ Edwards, ...
Microbial genomics 2 (11), 2016
2512016
PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change
M Fourment, MJ Gibbs
BMC evolutionary biology 6, 1-5, 2006
2422006
A comparison of common programming languages used in bioinformatics
M Fourment, MR Gillings
BMC bioinformatics 9, 1-9, 2008
2072008
Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
KI Bos, A Herbig, J Sahl, N Waglechner, M Fourment, SA Forrest, J Klunk, ...
Elife 5, e12994, 2016
2002016
The contrasting phylodynamics of human influenza B viruses
D Vijaykrishna, EC Holmes, U Joseph, M Fourment, YCF Su, R Halpin, ...
Elife 4, e05055, 2015
1992015
African apes as reservoirs of Plasmodium falciparum and the origin and diversification of the Laverania subgenus
L Duval, M Fourment, E Nerrienet, D Rousset, SA Sadeuh, SM Goodman, ...
Proceedings of the National Academy of Sciences 107 (23), 10561-10566, 2010
1742010
Influenza A virus migration and persistence in North American wild birds
J Bahl, S Krauss, D Kühnert, M Fourment, G Raven, SP Pryor, LJ Niles, ...
PLoS pathogens 9 (8), e1003570, 2013
1062013
Antigenic and molecular characterization of avian influenza A (H9N2) viruses, Bangladesh
K Shanmuganatham, MM Feeroz, L Jones-Engel, GJD Smith, M Fourment, ...
Emerging infectious diseases 19 (9), 1393, 2013
912013
Chimpanzee Malaria Parasites Related to Plasmodium ovale in Africa
L Duval, E Nerrienet, D Rousset, SA Sadeuh Mba, S Houze, M Fourment, ...
PLoS One 4 (5), e5520, 2009
812009
Genetic evolution of the neuraminidase of influenza A (H3N2) viruses from 1968 to 2009 and its correspondence to haemagglutinin evolution
KB Westgeest, M de Graaf, M Fourment, TM Bestebroer, R van Beek, ...
The Journal of general virology 93 (Pt 9), 1996, 2012
802012
Accumulating variation at conserved sites in potyvirus genomes is driven by species discovery and affects degenerate primer design
L Zheng, PJ Wayper, AJ Gibbs, M Fourment, BC Rodoni, MJ Gibbs
PLoS One 3 (2), e1586, 2008
752008
Inconsistencies in estimating the age of HIV-1 subtypes due to heterotachy
JO Wertheim, M Fourment, SL Kosakovsky Pond
Molecular biology and evolution 29 (2), 451-456, 2012
722012
The impact of migratory flyways on the spread of avian influenza virus in North America
M Fourment, AE Darling, EC Holmes
BMC evolutionary biology 17, 1-12, 2017
532017
The recent establishment of North American H10 lineage influenza viruses in Australian wild waterfowl and the evolution of Australian avian influenza viruses
D Vijaykrishna, YM Deng, YCF Su, M Fourment, P Iannello, GG Arzey, ...
Journal of virology 87 (18), 10182-10189, 2013
452013
Seqotron: a user-friendly sequence editor for Mac OS X
M Fourment, EC Holmes
BMC research notes 9, 1-4, 2016
442016
19 dubious ways to compute the marginal likelihood of a phylogenetic tree topology
M Fourment, AF Magee, C Whidden, A Bilge, FA Matsen IV, VN Minin
Systematic biology 69 (2), 209-220, 2020
392020
Effective online Bayesian phylogenetics via sequential Monte Carlo with guided proposals
M Fourment, BC Claywell, V Dinh, C McCoy, FA Matsen IV, AE Darling
Systematic biology 67 (3), 490-502, 2018
352018
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