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Xiaoqi Zheng
Xiaoqi Zheng
Verified email at shnu.edu.cn - Homepage
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Cited by
Year
Simplified and representative bacterial community of maize roots
B Niu, JN Paulson, X Zheng, R Kolter
Proceedings of the National Academy of Sciences 114 (12), E2450-E2459, 2017
5972017
Predicting anticancer drug responses using a dual-layer integrated cell line-drug network model
N Zhang, H Wang, Y Fang, J Wang, X Zheng, XS Liu
PLoS computational biology 11 (9), e1004498, 2015
1902015
Anticancer drug sensitivity prediction in cell lines from baseline gene expression through recursive feature selection
Z Dong, N Zhang, C Li, H Wang, Y Fang, J Wang, X Zheng
BMC cancer 15, 1-12, 2015
1632015
Prediction of protein structural class for low-similarity sequences using support vector machine and PSI-BLAST profile
T Liu, X Zheng, J Wang
Biochimie 92 (10), 1330-1334, 2010
1442010
Landscape of B cell immunity and related immune evasion in human cancers
X Hu, J Zhang, J Wang, J Fu, T Li, X Zheng, B Wang, S Gu, P Jiang, J Fan, ...
Nature genetics 51 (3), 560-567, 2019
1422019
Estimating and accounting for tumor purity in the analysis of DNA methylation data from cancer studies
X Zheng, N Zhang, HJ Wu, H Wu
Genome biology 18, 1-14, 2017
1302017
Accurate prediction of protein structural class using auto covariance transformation of PSI-BLAST profiles
T Liu, X Geng, X Zheng, R Li, J Wang
Amino acids 42, 2243-2249, 2012
1102012
Snail1-dependent p53 repression regulates expansion and activity of tumour-initiating cells in breast cancer
T Ni, XY Li, N Lu, T An, ZP Liu, R Fu, WC Lv, YW Zhang, XJ Xu, ...
Nature cell biology 18 (11), 1221-1232, 2016
1052016
The nuclear matrix protein HNRNPU maintains 3D genome architecture globally in mouse hepatocytes
H Fan, P Lv, X Huo, J Wu, Q Wang, L Cheng, Y Liu, QQ Tang, L Zhang, ...
Genome Research 28 (2), 192-202, 2018
1042018
MethylPurify: tumor purity deconvolution and differential methylation detection from single tumor DNA methylomes
X Zheng, Q Zhao, HJ Wu, W Li, H Wang, CA Meyer, QA Qin, H Xu, C Zang, ...
Genome biology 15, 1-13, 2014
972014
Prediction of subcellular location of apoptosis proteins using pseudo amino acid composition: an approach from auto covariance transformation
T Liu, X Zheng, C Wang, J Wang
Protein and peptide letters 17 (10), 1263-1269, 2010
832010
An ensemble classifier for eukaryotic protein subcellular location prediction using gene ontology categories and amino acid hydrophobicity
L Li, Y Zhang, L Zou, C Li, B Yu, X Zheng, Y Zhou
PLoS One 7 (1), e31057, 2012
792012
Prediction of bacterial protein subcellular localization by incorporating various features into Chou's PseAAC and a backward feature selection approach
L Li, S Yu, W Xiao, Y Li, M Li, L Huang, X Zheng, S Zhou, H Yang
Biochimie 104, 100-107, 2014
752014
Prediction of protein subcellular multi-localization based on the general form of Chou's pseudo amino acid composition
LQ Li, Y Zhang, LY Zou, Y Zhou, XQ Zheng
Protein and Peptide Letters 19 (4), 375-387, 2012
742012
InfiniumPurify: an R package for estimating and accounting for tumor purity in cancer methylation research
Y Qin, H Feng, M Chen, H Wu, X Zheng
Genes & diseases 5 (1), 43-45, 2018
682018
Predicting subcellular location of apoptosis proteins with pseudo amino acid composition: approach from amino acid substitution matrix and auto covariance transformation
X Yu, X Zheng, T Liu, Y Dou, J Wang
Amino acids 42, 1619-1625, 2012
672012
A systematic study on drug-response associated genes using baseline gene expressions of the Cancer Cell Line Encyclopedia
X Liu, J Yang, Y Zhang, Y Fang, F Wang, J Wang, X Zheng, J Yang
Scientific reports 6 (1), 22811, 2016
642016
ERCC6L2 promotes DNA orientation-specific recombination in mammalian cells
X Liu, T Liu, Y Shang, P Dai, W Zhang, BJ Lee, M Huang, D Yang, Q Wu, ...
Cell research 30 (9), 732-744, 2020
552020
Predicting protein structural class by incorporating patterns of over-represented k-mers into the general form of Chou's PseAAC
YF Qin, CH Wang, XQ Yu, J Zhu, TG Liu, XQ Zheng
Protein and peptide letters 19 (4), 388-397, 2012
532012
Predicting tumor purity from methylation microarray data
N Zhang, HJ Wu, W Zhang, J Wang, H Wu, X Zheng
Bioinformatics 31 (21), 3401-3405, 2015
522015
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