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The human colon cancer methylome shows similar hypo-and hypermethylation at conserved tissue-specific CpG island shores
RA Irizarry, C Ladd-Acosta, B Wen, Z Wu, C Montano, P Onyango, H Cui, ...
Nature genetics 41 (2), 178-186, 2009
24302009
A model-based background adjustment for oligonucleotide expression arrays
Z Wu, RA Irizarry, R Gentleman, F Martinez-Murillo, F Spencer
Journal of the American statistical Association 99 (468), 909-917, 2004
20782004
Removing technical variability in RNA-seq data using conditional quantile normalization
KD Hansen, RA Irizarry, Z Wu
Biostatistics 13 (2), 204-216, 2012
6612012
Preprocessing of oligonucleotide array data
Z Wu, RA Irizarry
Nature biotechnology 22 (6), 656-658, 2004
4832004
A benchmark for Affymetrix GeneChip expression measures
LM Cope, RA Irizarry, HA Jaffee, Z Wu, TP Speed
Bioinformatics 20 (3), 323-331, 2004
4302004
Comparison of Affymetrix GeneChip expression measures
RA Irizarry, Z Wu, HA Jaffee
Bioinformatics 22 (7), 789-794, 2006
4042006
Stochastic models inspired by hybridization theory for short oligonucleotide arrays
Z Wu, RA Irizarry
Proceedings of the eighth annual international conference on Research in …, 2004
3752004
DNA hypomethylation arises later in prostate cancer progression than CpG island hypermethylation and contributes to metastatic tumor heterogeneity
S Yegnasubramanian, MC Haffner, Y Zhang, B Gurel, TC Cornish, Z Wu, ...
Cancer research 68 (21), 8954-8967, 2008
3382008
The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diverse phosphorus stress response
ST Dyhrman, BD Jenkins, TA Rynearson, MA Saito, ML Mercier, ...
PloS one 7 (3), e33768, 2012
3352012
A new shrinkage estimator for dispersion improves differential expression detection in RNA-seq data
H Wu, C Wang, Z Wu
Biostatistics 14 (2), 232-243, 2013
2702013
Sequencing technology does not eliminate biological variability
KD Hansen, Z Wu, RA Irizarry, JT Leek
Nature biotechnology 29 (7), 572-573, 2011
2322011
Alternative statistical parameter for high-throughput screening assay quality assessment
Y Sui, Z Wu
Journal of biomolecular screening 12 (2), 229-234, 2007
1512007
Gold nanocage-photosensitizer conjugates for dual-modal image-guided enhanced photodynamic therapy
A Srivatsan, SV Jenkins, M Jeon, Z Wu, C Kim, J Chen, RK Pandey
Theranostics 4 (2), 163, 2014
1382014
Targeting tumor-associated macrophages in an orthotopic murine model of diffuse malignant mesothelioma
NR Miselis, ZJ Wu, N Van Rooijen, AB Kane
Molecular cancer therapeutics 7 (4), 788-799, 2008
1382008
Anti-HIV activity in cervical-vaginal secretions from HIV-positive and-negative women correlate with innate antimicrobial levels and IgG antibodies
M Ghosh, JV Fahey, Z Shen, T Lahey, S Cu-Uvin, Z Wu, K Mayer, ...
PloS one 5 (6), e11366, 2010
1352010
Adipose tissue palmitoleic acid and obesity in humans: does it behave as a lipokine?
J Gong, H Campos, S McGarvey, Z Wu, R Goldberg, A Baylin
The American journal of clinical nutrition 93 (1), 186-191, 2011
1092011
PROPER: comprehensive power evaluation for differential expression using RNA-seq
H Wu, C Wang, Z Wu
Bioinformatics 31 (2), 233-241, 2015
1012015
Gcrma: background adjustment using sequence information
J Wu, R Irizarry, J MacDonald, J Gentry
R package version 2200, 3-10, 2012
1002012
Use of mixture models in a microarray-based screening procedure for detecting differentially represented yeast mutants
RA Irizarry, SL Ooi, Z Wu, JD Boeke
Statistical applications in genetics and molecular biology 2 (1), 2003
952003
Genome-wide methylation analysis of human colon cancer reveals similar hypo-and hypermethylation at conserved tissue-specific CpG island shores
RA Irizarry, C Ladd-Acosta, B Wen, Z Wu, C Montano, P Onyango, H Cui, ...
Nature genetics 41 (2), 178, 2009
902009
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