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Krisztian Koos
Krisztian Koos
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Year
nucleAIzer: a parameter-free deep learning framework for nucleus segmentation using image style transfer
R Hollandi, A Szkalisity, T Toth, E Tasnadi, C Molnar, B Mathe, I Grexa, ...
Cell Systems 10 (5), 453-458. e6, 2020
1752020
Phenotypic image analysis software tools for exploring and understanding big image data from cell-based assays
K Smith, F Piccinini, T Balassa, K Koos, T Danka, H Azizpour, P Horvath
Cell systems 6 (6), 636-653, 2018
822018
A deep learning framework for nucleus segmentation using image style transfer
R Hollandi, A Szkalisity, T Toth, E Tasnadi, C Molnar, B Mathe, I Grexa, ...
Biorxiv, 580605, 2019
452019
The NF45/NF90 heterodimer contributes to the biogenesis of 60S ribosomal subunits and influences nucleolar morphology
F Wandrey, C Montellese, K Koos, L Badertscher, L Bammert, AG Cook, ...
Molecular and cellular biology 35 (20), 3491-3503, 2015
392015
Automatic deep learning-driven label-free image-guided patch clamp system
K Koos, G Oláh, T Balassa, N Mihut, M Rózsa, A Ozsvár, E Tasnadi, ...
Nature communications 12 (1), 1-11, 2021
292021
DIC image reconstruction using an energy minimization framework to visualize optical path length distribution
K Koos, J Molnár, L Kelemen, G Tamás, P Horvath
Scientific reports 6 (1), 30420, 2016
202016
SpheroidPicker for automated 3D cell culture manipulation using deep learning
I Grexa, A Diosdi, M Harmati, A Kriston, N Moshkov, K Buzas, V Pietiäinen, ...
Scientific Reports 11 (1), 14813, 2021
162021
Segmentation metric misinterpretations in bioimage analysis
D Hirling, E Tasnadi, J Caicedo, MV Caroprese, R Sjögren, M Aubreville, ...
Nature methods, 1-4, 2023
152023
Cell type-specific arousal-dependent modulation of thalamic activity in the lateral geniculate nucleus
B Molnár, P Sere, S Bordé, K Koós, N Zsigri, P Horváth, ML Lőrincz
Cerebral Cortex Communications 2 (2), tgab020, 2021
142021
Raman spectral signatures of serum-derived extracellular vesicle-enriched isolates may support the diagnosis of CNS tumors
M Bukva, G Dobra, J Gomez-Perez, K Koos, M Harmati, ...
Cancers 13 (6), 1407, 2021
112021
Pipette hunter: patch-clamp pipette detection
K Koos, J Molnár, P Horvath
Image Analysis: 20th Scandinavian Conference, SCIA 2017, Tromsř, Norway …, 2017
82017
Cell lines and clearing approaches: a single-cell level 3D light-sheet fluorescence microscopy dataset of multicellular spheroids
A Diosdi, D Hirling, M Kovacs, T Toth, M Harmati, K Koos, K Buzas, ...
Data in Brief 36, 107090, 2021
72021
DIC microscopy image reconstruction using a novel variational framework
K Koos, J Molnar, P Horvath
2015 International Conference on Digital Image Computing: Techniques and …, 2015
62015
A quantitative metric for the comparative evaluation of optical clearing protocols for 3D multicellular spheroids
A Diosdi, D Hirling, M Kovacs, T Toth, M Harmati, K Koos, K Buzas, ...
Computational and Structural Biotechnology Journal 19, 1233-1243, 2021
32021
SpheroidPicker: An Automated 3D cell culture manipulator robot using deep learning
G Istvan, D Akos, K Andras, M Nikita, H Maria, B Krisztina, P Vilja, ...
bioRxiv, 2021
32021
Automatic deep learning driven label-free image guided patch clamp system for human and rodent in vitro slice physiology
K Koos, G Oláh, T Balassa, N Mihut, M Rózsa, A Ozsvár, E Tasnadi, ...
bioRxiv, 2020.05. 05.078162, 2020
32020
Phase measurement using DIC microscopy
K Koos, B Peksel, L Kelemen
Acta Cybernetica 23 (2), 629-643, 2017
32017
SuperCUT, an unsupervised multimodal image registration with deep learning for biomedical microscopy
I Grexa, ZZ Iván, E Migh, F Kovács, HA Bolck, X Zheng, A Mund, ...
Briefings in Bioinformatics 25 (2), bbae029, 2024
2024
Correlative Fluorescence and Raman Microscopy to Define Mitotic Stages at the Single-Cell Level: Opportunities and Limitations in the AI Era
C Voros, D Bauer, E Migh, I Grexa, AG Végh, B Szalontai, G Castellani, ...
Biosensors 13 (2), 187, 2023
2023
Pipette Hunter 3D: Fluorescent Micropipette Detection
D Hirling, K Koos, J Molnár, P Horvath
Trends in Biomathematics: Modeling Cells, Flows, Epidemics, and the …, 2020
2020
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