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Rodrigo A. Moreira
Rodrigo A. Moreira
Verified email at bcamath.org
Title
Cited by
Cited by
Year
Molecular insights into receptor binding energetics and neutralization of SARS-CoV-2 variants
M Koehler, A Ray, RA Moreira, B Juniku, AB Poma, D Alsteens
Nature communications 12 (1), 6977, 2021
622021
Characterization of structural and energetic differences between conformations of the SARS-CoV-2 spike protein
RA Moreira, HV Guzman, S Boopathi, JL Baker, AB Poma
Materials 13 (23), 5362, 2020
592020
Quantitative determination of mechanical stability in the novel coronavirus spike protein
RA Moreira, M Chwastyk, JL Baker, HV Guzman, AB Poma
Nanoscale 12 (31), 16409-16413, 2020
562020
Mapping mechanostable pulling geometries of a therapeutic anticalin/CTLA-4 protein complex
Z Liu, RA Moreira, A Dujmović, H Liu, B Yang, AB Poma, MA Nash
Nano letters 22 (1), 179-187, 2021
212021
The Euler characteristic and topological phase transitions in complex systems
EC de Amorim Filho, RA Moreira, FAN Santos
Journal of Physics: Complexity 3 (2), 025003, 2022
82022
Martini 3 Model of cellulose microfibrils: on the route to capture large conformational changes of polysaccharides
RA Moreira, SAL Weber, AB Poma
Molecules 27 (3), 976, 2022
82022
Quantification of molecular orbitals based on projection operators: Methodological development and applications to basicity prediction of organic compounds in the gas phase
LS Braga, RA Moreira, DHS Leal, TC Ramalho
Chemical Physics Letters 726, 87-92, 2019
62019
The G\= oMartini approach: Revisiting the concept of contact maps and the modelling of protein complexes
LF Cofas-Vargas, RA Moreira, S Poblete, M Chwastyk, AB Poma
arXiv preprint arXiv:2311.08174, 2023
22023
Optimizing mechanostable anchor points of engineered lipocalin in complex with CTLA-4
Z Liu, RA Moreira, A Dujmović, H Liu, B Yang, AB Poma, MA Nash
bioRxiv, 2021.03. 09.434559, 2021
22021
Entanglement and Electronic Correlation in Polycyclic Aromatic Molecules
RA Moreira, CP de Melo
Brazilian Journal of Physics 47, 575-582, 2017
22017
On the separability of the extended molecule: Constructing the best localized molecular orbitals for an organic molecule bridging two model electrodes
RA Moreira, CP de Melo
The Journal of Chemical Physics 141 (12), 2014
22014
Single-Molecule Investigation of the Binding Interface Stability of SARS-CoV-2 Variants with ACE2
A Ray, TT Minh Tran, R Santos Natividade, RA Moreira, JD Simpson, ...
ACS Nanoscience Au 4 (2), 136-145, 2024
12024
Molecular insight into the self-assembly process of cellulose Iβ microfibril
TTM Thu, RA Moreira, SAL Weber, AB Poma
International Journal of Molecular Sciences 23 (15), 8505, 2022
12022
Assessing the Stability of Biological Fibrils by Molecular-Scale Simulations
RA Moreira, JL Baker, HV Guzman, AB Poma
Computer Simulations of Aggregation of Proteins and Peptides, 357-378, 2022
12022
All atom simulations snapshots and contact maps analysis scripts for SARS-CoV-2002 and SARS-CoV-2 spike proteins with and without ACE2 enzyme
RA Moreira, M Chwastyk, JL Baker, HV Guzman, AB Poma
Zenodo, 2020
12020
Energy Gaps of Polyradicals from an Effective and Transferable Hamiltonian with through-Bond Interactions
RA Moreira
Journal of Chemical Theory and Computation 14 (1), 1-8, 2018
12018
GōMartini 3: From large conformational changes in proteins to environmental bias corrections
PCT Souza, LP Borges Araujo, C Brasnett, RA Moreira, F Grunewald, ...
bioRxiv, 2024.04. 15.589479, 2024
2024
An efficient set-theoretic algorithm for high-order Forman-Ricci curvature
DB de Souza, JTS da Cunha, RA Moreira, FAN Santos, S Rodrigues
arXiv preprint arXiv:2308.11763, 2023
2023
Discovering Secondary Protein Structures via Local Euler Curvature
RA Moreira, R Braddell, FAN Santos, T Fulop, M Desroches, ...
bioRxiv, 2023.11. 27.568841, 2023
2023
Mapping Mechanostable Pulling Geometries of Protein-Ligand Complexes
Z Liu, RA Moreira, A Dujmović, H Liu, B Yang, AB Poma, MA Nash
Biophysical Journal 120 (3), 362a, 2021
2021
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