Ioana M. Ilie
Title
Cited by
Cited by
Year
An elementary singularity-free Rotational Brownian Dynamics algorithm for anisotropic particles
IM Ilie, WJ Briels, WK den Otter
The Journal of chemical physics 142 (11), 03B610_1, 2015
262015
A coarse grained protein model with internal degrees of freedom. Application to α-synuclein aggregation
IM Ilie, WK den Otter, WJ Briels
The Journal of chemical physics 144 (8), 085103, 2016
232016
Simulation studies of amyloidogenic polypeptides and their aggregates
IM Ilie, A Caflisch
Chemical reviews 119 (12), 6956-6993, 2019
192019
Rotational Brownian dynamics simulations of clathrin cage formation
IM Ilie, WK den Otter, WJ Briels
The Journal of chemical physics 141 (6), 08B607_1, 2014
142014
Intrinsic conformational preferences and interactions in α-synuclein fibrils: insights from molecular dynamics simulations
IM Ilie, D Nayar, WK Den Otter, NFA Van Der Vegt, WJ Briels
Journal of chemical theory and computation 14 (6), 3298-3310, 2018
92018
The attachment of -synuclein to a fiber: A coarse-grain approach
IM Ilie, WK den Otter, WJ Briels
The Journal of Chemical Physics 146 (11), 115102, 2017
82017
Disorder at the Tips of a Disease-Relevant Aβ42 Amyloid Fibril: A Molecular Dynamics Study
IM Ilie, A Caflisch
The Journal of Physical Chemistry B 122 (49), 11072-11082, 2018
62018
Flanking sequence preference modulates de novo DNA methylation in the mouse genome
I Mallona, IM Ilie, M Manzo, A Caflisch, T Baubec
bioRxiv, 2020
2020
Structural insights into amyloid-β (1-42) fibril elongation
I Ilie, A Caflisch
APS 2018, S50. 009, 2018
2018
α-synuclein under the magnifying glass. Insights from atomistic and coarse-grain simulations
IM Ilie, D Nayar, WK den Otter, NFA van der Vegt, WJ Briels, ...
APS 2017, L6. 001, 2017
2017
Aggregation and Fibrillation of α-Synuclein by Polymorph Patchy Particles
IM Ilie, WK den Otter, WJ Briels
Biophysical Journal 110 (3), 551a, 2016
2016
Chameleon behaviour of α-synuclein: brownian dynamics simulations of protein aggregation
IM Ilie
2015
Protein aggregation by Rotational Brownian Dynamics
IM Ilie, WK den Otter, WJ Briels
2015
Aggregation of rigid and polymporph proteins by Brownian Dynamics simulations
IM Ilie, WK den Otter, WJ Briels
2015
Alpha-synuclein as a Patchy Particle
IM Ilie, WK den Otter, WJ Briels
2015
Adaptive Particle Simulations of Alpha-Synuclein Fibril Formation
IM Ilie, WK den Otter, WJ Briels
Biophysical Journal 108 (2), 227a, 2015
2015
Clathrin Aggregation by Rotational Brownian Dynamics
IM Ilie, WK den Otter, WJ Briels
Biophysical journal 106 (2), 31a, 2014
2014
Rotational Brownian Dynamics Simulations of Proteins as Patchy Particles
IM Ilie, WK den Otter, WJ Briels
2014
Brownian Dynamics simulation of Clathrin Cage Formation
IM Ilie, WK Den Otter, WJ Briels
9th European Biophysics Congress, EBSA 2013, 2013
2013
Developing a Brownian Dynamics Algorithm to Simulate Protein Aggregation
IM Ilie, WK den Otter, WJ Briels
Biophysical Journal 104 (2), 390a, 2013
2013
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Articles 1–20