The SARS-CoV-2 Spike variant D614G favors an open conformational state RA Mansbach, S Chakraborty, K Nguyen, DC Montefiori, B Korber, ... Biophysical Journal 120 (3), 298a, 2021 | 206 | 2021 |
HIV-1 and SARS-CoV-2: Patterns in the evolution of two pandemic pathogens W Fischer, EE Giorgi, S Chakraborty, K Nguyen, T Bhattacharya, J Theiler, ... Cell host & microbe 29 (7), 1093-1110, 2021 | 84 | 2021 |
Visualization of the HIV-1 Env glycan shield across scales ZT Berndsen, S Chakraborty, X Wang, CA Cottrell, JL Torres, JK Diedrich, ... Proceedings of the National Academy of Sciences 117 (45), 28014-28025, 2020 | 64 | 2020 |
A mechanism for acetylcholine receptor gating based on structure, coupling, phi, and flip S Gupta, S Chakraborty, R Vij, A Auerbach Journal of General Physiology 149 (1), 85-103, 2017 | 54 | 2017 |
Exploring the role of glycans in the interaction of SARS-CoV-2 RBD and human receptor ACE2 K Nguyen, S Chakraborty, RA Mansbach, PD Manrique, B Korber, ... Biophysical Journal 120 (3), 15a, 2021 | 33 | 2021 |
Emergence of alternative structures in amyloid beta 1-42 monomeric landscape by N-terminal hexapeptide amyloid inhibitors S Chakraborty, P Das Scientific Reports 7 (1), 9941, 2017 | 28 | 2017 |
Functional differences between neurotransmitter binding sites of muscle acetylcholine receptors TK Nayak, I Bruhova, S Chakraborty, S Gupta, W Zheng, A Auerbach Proceedings of the National Academy of Sciences 111 (49), 17660-17665, 2014 | 25 | 2014 |
Structural correlates of affinity in fetal versus adult endplate nicotinic receptors TK Nayak, S Chakraborty, W Zheng, A Auerbach Nature communications 7 (1), 11352, 2016 | 19 | 2016 |
Decrypting the structural, dynamic, and energetic basis of a monomeric kinesin interacting with a tubulin dimer in three ATPase states by all-atom molecular dynamics simulation S Chakraborty, W Zheng Biochemistry 54 (3), 859-869, 2015 | 17 | 2015 |
Network for Genomic Surveillance in South Africa (NGS-SA). HIV-1 and SARS-CoV-2: patterns in the evolution of two pandemic pathogens W Fischer, EE Giorgi, S Chakraborty, K Nguyen, T Bhattacharya, J Theiler Cell Host Microbe 29, 1093-1110, 2021 | 13 | 2021 |
Quantification of the resilience and vulnerability of HIV-1 native glycan shield at atomistic detail S Chakraborty, ZT Berndsen, NW Hengartner, BT Korber, AB Ward, ... IScience 23 (12), 2020 | 13* | 2020 |
Function of the M1 π‐helix in endplate receptor activation and desensitization P Purohit, S Chakraborty, A Auerbach The Journal of physiology 593 (13), 2851-2866, 2015 | 13 | 2015 |
The SARS-CoV-2 Spike variant D614G favors an open conformational state. Sci Adv. 2021; 7: eabf3671 RA Mansbach, S Chakraborty, K Nguyen, DC Montefiori, B Korber, ... | 9 | |
Development of Martini 2.2 parameters for N-glycans: a case study of the HIV-1 Env glycoprotein dynamics S Chakraborty, K Wagh, S Gnanakaran, CA López Glycobiology 31 (7), 787-799, 2021 | 8 | 2021 |
Network analysis uncovers the communication structure of SARS-CoV-2 spike protein identifying sites for immunogen design PD Manrique, S Chakraborty, R Henderson, RJ Edwards, R Mansbach, ... Iscience 26 (1), 2023 | 6 | 2023 |
Upper limit on the cosmic gamma-ray burst rate from high energy diffuse neutrino background P Bhattacharjee, S Chakraborty, S Das Gupta, K Kar Physical Review D—Particles, Fields, Gravitation, and Cosmology 77 (4), 043008, 2008 | 6 | 2008 |
Graph-directed approach for downselecting toxins for experimental structure determination RA Mansbach, S Chakraborty, T Travers, S Gnanakaran Marine Drugs 18 (5), 256, 2020 | 5 | 2020 |
Fabricating paper based devices using correction pens. Sci Rep 9: 1752 NK Mani, A Prabhu, SK Biswas, S Chakraborty | 5 | 2019 |
Molecular insights into antibody-mediated protection against the prototypic simian immunodeficiency virus F Zhao, ZT Berndsen, N Pedreño-Lopez, A Burns, JD Allen, S Barman, ... Nature communications 13 (1), 5236, 2022 | 3 | 2022 |
A neutralizing antibody target in early HIV-1 infection was recapitulated in rhesus macaques immunized with the transmitted/founder envelope sequence S Welbourn, S Chakraborty, JE Yang, AS Gleinich, S Gangadhara, ... PLoS pathogens 18 (5), e1010488, 2022 | 2 | 2022 |