Louis du Plessis
Louis du Plessis
Verified email at zoo.ox.ac.uk - Homepage
TitleCited byYear
Establishment and cryptic transmission of Zika virus in Brazil and the Americas
NR Faria, J Quick, IM Claro, J Theze, JG de Jesus, M Giovanetti, ...
Nature 546 (7658), 406, 2017
2082017
The genomes of two key bumblebee species with primitive eusocial organization
BM Sadd, SM Barribeau, G Bloch, DC De Graaf, P Dearden, CG Elsik, ...
Genome biology 16 (1), 76, 2015
1702015
The what, where, how and why of gene ontology—a primer for bioinformaticians
L du Plessis, N Škunca, C Dessimoz
Briefings in bioinformatics 12 (6), 723-735, 2011
1352011
Gene expression differences underlying genotype-by-genotype specificity in a host–parasite system
SM Barribeau, BM Sadd, L du Plessis, P Schmid-Hempel
Proceedings of the National Academy of Sciences 111 (9), 3496-3501, 2014
732014
A depauperate immune repertoire precedes evolution of sociality in bees
SM Barribeau, BM Sadd, L Du Plessis, MJF Brown, SD Buechel, ...
Genome biology 16 (1), 83, 2015
702015
Insights into the early epidemic spread of Ebola in Sierra Leone provided by viral sequence data
T Stadler, D Kühnert, DA Rasmussen, L du Plessis
PLoS currents 6, 2014
642014
Genomic and epidemiological monitoring of yellow fever virus transmission potential
NR Faria, MUG Kraemer, SC Hill, JG de Jesus, RS Aguiar, FCM Iani, ...
Science 361 (6405), 894-899, 2018
422018
Genomic epidemiology reconstructs the introduction and spread of Zika virus in Central America and Mexico
J Thézé, T Li, L du Plessis, J Bouquet, MUG Kraemer, S Somasekar, G Yu, ...
Cell host & microbe 23 (6), 855-864. e7, 2018
182018
Getting to the root of epidemic spread with phylodynamic analysis of genomic data
L du Plessis, T Stadler
Trends in microbiology 23 (7), 383-386, 2015
142015
How good are statistical models at approximating complex fitness landscapes?
L du Plessis, GE Leventhal, S Bonhoeffer
Molecular biology and evolution 33 (9), 2454-2468, 2016
132016
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ...
PLoS computational biology 15 (4), e1006650, 2019
102019
Impact of the tree prior on estimating clock rates during epidemic outbreaks
S Möller, L du Plessis, T Stadler
Proceedings of the National Academy of Sciences 115 (16), 4200-4205, 2018
92018
Taming the BEAST—A Community Teaching Material Resource for BEAST 2
J Barido-Sottani, V Bošková, LD Plessis, D Kühnert, C Magnus, V Mitov, ...
Systematic biology 67 (1), 170-174, 2017
92017
An investigation of data compression techniques for hyperspectral core imager data
KA Cawse, S Damelin, L du Plessis, R McIntyre, M Mitchley, S Michael
92008
Analysis of hyperspectral data with diffusion maps and fuzzy ART
R Xu, L Du Plessis, S Damelin, M Sears, DC Wunsch
2009 International Joint Conference on Neural Networks, 3390-3397, 2009
82009
Reducing dimensionality of hyperspectral data with diffusion maps and clustering with K-means and fuzzy art
L Du Plessis, R Xu, S Damelin, M Sears, DC Wunsch
Inderscience 3 (3), 232, 2011
72011
Reducing the dimensionality of hyperspectral data using diffusion maps
L du Plessis, S Damelin, M Sears
2009 IEEE International Geoscience and Remote Sensing Symposium 4, IV-885-IV-888, 2009
72009
The genomes of Crithidia bombi and C. expoeki, common parasites of bumblebees
P Schmid-Hempel, M Aebi, S Barribeau, T Kitajima, L Du Plessis, ...
PloS one 13 (1), e0189738, 2018
62018
Tracing the impact of public health interventions on HIV-1 transmission in Portugal using molecular epidemiology
TI Vasylyeva, L du Plessis, AC Pineda-Peña, D Kühnert, P Lemey, ...
The Journal of infectious diseases 220 (2), 233-243, 2019
12019
Understanding the spread and adaptation of infectious diseases using genomic sequencing data
L Du Plessis
ETH Zurich, 2016
12016
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Articles 1–20