Colin Worby
Colin Worby
Broad Institute
Verified email at broadinstitute.org
TitleCited byYear
Within-host bacterial diversity hinders accurate reconstruction of transmission networks from genomic distance data
CJ Worby, M Lipsitch, WP Hanage
PLoS computational biology 10 (3), 2014
1012014
Estimating the Effectiveness of Isolation and Decolonization Measures in Reducing Transmission of Methicillin-resistant Staphylococcus aureus in Hospital General …
CJ Worby, D Jeyaratnam, JV Robotham, T Kypraios, PD O'neill, ...
American journal of epidemiology 177 (11), 1306-1313, 2013
412013
Estimating the Effectiveness of Isolation and Decolonization Measures in Reducing Transmission of Methicillin-resistant Staphylococcus aureus in Hospital General …
CJ Worby, D Jeyaratnam, JV Robotham, T Kypraios, PD O'neill, ...
American journal of epidemiology 177 (11), 1306-1313, 2013
412013
Reconstructing transmission trees for communicable diseases using densely sampled genetic data
CJ Worby, PD O'Neill, T Kypraios, JV Robotham, D De Angelis, ...
The annals of applied statistics 10 (1), 395, 2016
362016
Shared genomic variants: identification of transmission routes using pathogen deep-sequence data
CJ Worby, M Lipsitch, WP Hanage
American journal of epidemiology 186 (10), 1209-1216, 2017
342017
On the relative role of different age groups in influenza epidemics
CJ Worby, SS Chaves, J Wallinga, M Lipsitch, L Finelli, E Goldstein
Epidemics 13, 10-16, 2015
342015
Impact of mupirocin resistance on the transmission and control of healthcare-associated MRSA
SR Deeny, CJ Worby, O Tosas Auguet, BS Cooper, J Edgeworth, ...
Journal of Antimicrobial Chemotherapy 70 (12), 3366-3378, 2015
302015
The distribution of pairwise genetic distances: a tool for investigating disease transmission
CJ Worby, HH Chang, WP Hanage, M Lipsitch
Genetics 198 (4), 1395-1404, 2014
302014
THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites
HH Chang, CJ Worby, A Yeka, J Nankabirwa, MR Kamya, SG Staedke, ...
PLoS computational biology 13 (1), e1005348, 2017
292017
Microbial genomics of ancient plagues and outbreaks
CP Andam, CJ Worby, Q Chang, MG Campana
Trends in microbiology 24 (12), 978-990, 2016
282016
Identifying the effect of patient sharing on between-hospital genetic differentiation of methicillin-resistant Staphylococcus aureus
HH Chang, J Dordel, T Donker, CJ Worby, EJ Feil, WP Hanage, ...
Genome medicine 8 (1), 18, 2016
182016
Penicillin resistance of nonvaccine type pneumococcus before and after PCV13 introduction, United States
CP Andam, CJ Worby, R Gierke, L McGee, T Pilishvili, WP Hanage
Emerging infectious diseases 23 (6), 1012, 2017
152017
Bayesian reconstruction of transmission within outbreaks using genomic variants
N De Maio, CJ Worby, DJ Wilson, N Stoesser
PLoS computational biology 14 (4), e1006117, 2018
132018
Examining the role of different age groups, and of vaccination during the 2012 Minnesota pertussis outbreak
CJ Worby, C Kenyon, R Lynfield, M Lipsitch, E Goldstein
Scientific reports 5, 13182, 2015
132015
'SEEDY'(Simulation of Evolutionary and Epidemiological Dynamics): An R Package to Follow Accumulation of Within-Host Mutation in Pathogens
CJ Worby, TD Read
PloS one 10 (6), 2015
122015
On the relative role of different age groups during epidemics associated with respiratory syncytial virus
E Goldstein, HH Nguyen, P Liu, C Viboud, CA Steiner, CJ Worby, ...
The Journal of infectious diseases 217 (2), 238-244, 2018
62018
Statistical inference and modelling for nosocomial infections and the incorporation of whole genome sequence data
CJ Worby
University of Nottingham, 2013
52013
On the relative role of different age groups in influenza epidemics. Epidemics. 2015; 13: 10–16
CJ Worby, SS Chaves, J Wallinga, M Lipsitch, L Finelli, E Goldstein
5
On the role of different age groups and pertussis vaccines during the 2012 outbreak in Wisconsin
E Goldstein, CJ Worby, M Lipsitch
Open forum infectious diseases 5 (5), ofy082, 2018
22018
Population effect of influenza vaccination under co-circulation of non-vaccine variants and the case for a bivalent A/H3N2 vaccine component
CJ Worby, J Wallinga, M Lipsitch, E Goldstein
Epidemics 19, 74-82, 2017
22017
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Articles 1–20