| Metagenomic exploration of antibiotic resistance in soil JM Monier, S Demanèche, TO Delmont, A Mathieu, TM Vogel, P Simonet Current opinion in microbiology 14 (3), 229-235, 2011 | 127 | 2011 |
| Microbial community development and unseen diversity recovery in inoculated sterile soil TO Delmont, D Francioli, S Jacquesson, S Laoudi, A Mathieu, J Nesme, ... Biology and fertility of soils 50, 1069-1076, 2014 | 75 | 2014 |
| Life on human surfaces: skin metagenomics A Mathieu, TO Delmont, TM Vogel, P Robe, R Nalin, P Simonet PloS one 8 (6), e65288, 2013 | 71 | 2013 |
| The future of skin metagenomics A Mathieu, TM Vogel, P Simonet Research in microbiology 165 (2), 69-76, 2014 | 35 | 2014 |
| A standardized gnotobiotic mouse model harboring a minimal 15-member mouse gut microbiota recapitulates SOPF/SPF phenotypes M Darnaud, F De Vadder, P Bogeat, L Boucinha, AL Bulteau, A Bunescu, ... Nature Communications 12 (1), 6686, 2021 | 29 | 2021 |
| The interaction of secreted phospholipase A2-IIA with the microbiota alters its lipidome and promotes inflammation E Doré, C Joly-Beauparlant, S Morozumi, A Mathieu, T Lévesque, ... JCI insight 7 (2), 2022 | 25 | 2022 |
| Machine learning and deep learning applications in metagenomic taxonomy and functional annotation A Mathieu, M Leclercq, M Sanabria, O Perin, A Droit Frontiers in Microbiology 13, 811495, 2022 | 14 | 2022 |
| The gut microbiome in konzo MS Bramble, N Vashist, A Ko, S Priya, C Musasa, A Mathieu, DA Spencer, ... Nature communications 12 (1), 5371, 2021 | 12 | 2021 |
| Draft genome sequences of 15 bacterial species constituting the stable defined intestinal microbiota of the GM15 gnotobiotic mouse model C Elie, A Mathieu, A Saliou, A Villain, M Darnaud, F Leulier, A Tamellini Microbiology Resource Announcements 9 (35), 10.1128/mra. 00686-20, 2020 | 5 | 2020 |
| Multi-omics data integration reveals key variables contributing to subgingival microbiome dysbiosis-induced inflammatory response in a hyperglycemic microenvironment S Lafleur, A Bodein, J Mbuya Malaïka Mutombo, A Mathieu, ... International Journal of Molecular Sciences 24 (10), 8832, 2023 | 1 | 2023 |
| Comprehensive benchmark of integrative strategies for analyzing microbiome-metabolome relationships L Mangnier, M Mariaz, N Vashist, A Mathieu, A Bodein, MP Scott-Boyer, ... bioRxiv, 2024.01. 26.577441, 2024 | | 2024 |
| A standardized gnotobiotic mouse model harboring a minimal 15-member mouse gut microbiota recapitulates SOPF/SPF phenotypes F Leulier, M Darnaud, F De Vadder, P Bogeat, L Boucinha, AL Bulteau, ... | | 2021 |
| HCK and ABAA: A Newly Designed Pipeline to Improve Fungi Metabarcoding Analysis KD Mlaga, A Mathieu, CJ Beauparlant, A Ott, A Khodr, O Perin, A Droit Frontiers in Microbiology 12, 640693, 2021 | | 2021 |
| Etude fonctionnelle de la communauté microbienne de la peau par une approche métagénomique A Mathieu Ecole Centrale de Lyon, 2014 | | 2014 |
| Gene transfer from genetically modified plants to micro-organisms S Demanèche, A Mathieu, P Simonet 2nd Thünen Symposium on soil metagenomics, 2013 | | 2013 |
| Transferts de gènes de plantes génétiquement modifiées aux bactéries S Demanèche, A Mathieu, P Simonet VIème Colloque de l'Association Francophone d'Ecologie Microbienne (AFEM), 2013 | | 2013 |
| Ecology and Industrial Microbiology A Mathieu, TM Vogel, P Simonet, EK Silbergeld, C Bergstrom | | |
