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Shannon Clarke
Shannon Clarke
Senior Scientist, AgResearch
Verified email at agresearch.co.nz
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Cited by
Year
Salicylic acid dependent signaling promotes basal thermotolerance but is not essential for acquired thermotolerance in Arabidopsis thaliana
SM Clarke, LAJ Mur, JE Wood, IM Scott
The Plant Journal 38 (3), 432-447, 2004
4102004
Jasmonates act with salicylic acid to confer basal thermotolerance in Arabidopsis thaliana
SM Clarke, SM Cristescu, O Miersch, FJM Harren, C Wasternack, LAJ Mur
New Phytologist 182 (1), 175-187, 2009
3542009
Jasmonates act with salicylic acid to confer basal thermotolerance in Arabidopsis thaliana
SM Clarke, SM Cristescu, O Miersch, FJM Harren, C Wasternack, LAJ Mur
New Phytologist 182 (1), 175-187, 2009
3542009
Salicylate accumulation inhibits growth at chilling temperature in Arabidopsis
IM Scott, SM Clarke, JE Wood, LAJ Mur
Plant Physiology 135 (2), 1040-1049, 2004
3222004
Construction of relatedness matrices using genotyping-by-sequencing data
KG Dodds, JC McEwan, R Brauning, RM Anderson, TC van Stijn, ...
BMC genomics 16, 1-15, 2015
1612015
SNPs for parentage testing and traceability in globally diverse breeds of sheep
MP Heaton, KA Leymaster, TS Kalbfleisch, JW Kijas, SM Clarke, ...
PloS one 9 (4), e94851, 2014
1382014
The tuatara genome reveals ancient features of amniote evolution
NJ Gemmell, K Rutherford, S Prost, M Tollis, D Winter, JR Macey, ...
Nature 584 (7821), 403-409, 2020
1332020
Universal DNA methylation age across mammalian tissues
AT Lu, Z Fei, A Haghani, TR Robeck, JA Zoller, CZ Li, R Lowe, Q Yan, ...
BioRxiv, 2021.01. 18.426733, 2021
1032021
Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds
M Naval-Sanchez, Q Nguyen, S McWilliam, LR Porto-Neto, R Tellam, ...
Nature communications 9 (1), 859, 2018
992018
A high throughput single nucleotide polymorphism multiplex assay for parentage assignment in New Zealand sheep
SM Clarke, HM Henry, KG Dodds, TWD Jowett, TR Manley, RM Anderson, ...
PloS one 9 (4), e93392, 2014
892014
Assessing accuracy of imputation using different SNP panel densities in a multi-breed sheep population
RV Ventura, SP Miller, KG Dodds, B Auvray, M Lee, M Bixley, SM Clarke, ...
Genetics Selection Evolution 48, 1-20, 2016
672016
Prediction of genomic breeding values for growth, carcass and meat quality traits in a multi-breed sheep population using a HD SNP chip
LF Brito, SM Clarke, JC McEwan, SP Miller, NK Pickering, WE Bain, ...
BMC genetics 18, 1-17, 2017
652017
Universal DNA methylation age across mammalian tissues
AT Lu, Z Fei, A Haghani, TR Robeck, JA Zoller, CZ Li, R Lowe, Q Yan, ...
Nature aging 3 (9), 1144-1166, 2023
622023
Genetic parameters for various growth, carcass and meat quality traits in a New Zealand sheep population
LF Brito, JC McEwan, S Miller, W Bain, M Lee, K Dodds, SA Newman, ...
Small Ruminant Research 154, 81-91, 2017
602017
Specific requirements for cytochrome c-550 and the manganese-stabilizing protein in photoautotrophic strains of Synechocystis sp. PCC 6803 with mutations in the domain Gly-351 …
TR Morgan, JA Shand, SM Clarke, JJ Eaton-Rye
Biochemistry 37 (41), 14437-14449, 1998
511998
Genetic diversity of a New Zealand multi-breed sheep population and composite breeds’ history revealed by a high-density SNP chip
LF Brito, JC McEwan, SP Miller, NK Pickering, WE Bain, KG Dodds, ...
BMC genetics 18, 1-11, 2017
462017
Mutation of Phe-363 in the photosystem II protein CP47 impairs photoautotrophic growth, alters the chloride requirement, and prevents photosynthesis in the absence of either …
SM Clarke, JJ Eaton-Rye
Biochemistry 38 (9), 2707-2715, 1999
451999
Applications of the soil, plant and rumen microbiomes in pastoral agriculture
GT Attwood, SA Wakelin, SC Leahy, S Rowe, S Clarke, DF Chapman, ...
Frontiers in nutrition 6, 107, 2019
442019
DNA methylation networks underlying mammalian traits
A Haghani, CZ Li, TR Robeck, J Zhang, AT Lu, J Ablaeva, ...
Science 381 (6658), eabq5693, 2023
41*2023
Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps
V Prieur, SM Clarke, LF Brito, JC McEwan, MA Lee, R Brauning, ...
BMC genetics 18, 1-19, 2017
402017
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