Colin Semple

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Martin S. TaylorProfessor, MRC Human Genetics Unit, Institute of Genetics and Cancer, University of EdinburghVerified email at ed.ac.uk
Carninci PieroRIKEN IMS (Yokohama, JP) and Human Technopole (Milan, IT)Verified email at postman.riken.jp
James PrendergastUniversity of EdinburghVerified email at roslin.ed.ac.uk
Chris HaleyUniversity of EdinburghVerified email at igmm.ed.ac.uk
Alison MeynertMRC IGMM Human Genetics Unit, University of EdinburghVerified email at igmm.ed.ac.uk
hideya kawajiRIKEN PMIVerified email at gsc.riken.jp
Vera B KaiserMRC Human Genetics UnitVerified email at igmm.ed.ac.uk
Nuria Lopez-BigasICREA Research Professor at the Institute for Research in BiomedicineVerified email at irbbarcelona.org
Benjamin L. MooreIlluminaVerified email at illumina.com
Alistair ForrestHead of Systems Biology and Genomics, Harry Perkins Institute of Medical ResearchVerified email at perkins.uwa.edu.au
Carsten O. DaubAssociate Professor, Karolinska InstitutetVerified email at ki.se
Stephanie Le Hellarduniversity of bergenVerified email at med.uib.no
W BickmoreMRC Human Genetics Unit, University of EdinburghVerified email at igmm.ed.ac.uk
Attila GyeneseiSzentágothai Research Centre, University of PécsVerified email at pte.hu
Gracjan MichlewskiProfessor, Head of Dioscuri Centre for RNA-Protein Interactions in Human Health and DiseaseVerified email at iimcb.gov.pl
Javier F. CaceresMRC Human Genetics UnitVerified email at ed.ac.uk
Yael CostaWellcome Trust-MRC Cambridge Stem Cell InstituteVerified email at cam.ac.uk
Nick GoldmanEMBL-European Bioinformatics InstituteVerified email at ebi.ac.uk
David HumeMater Research Institute-University of QueenslandVerified email at uq.edu.au
Emily V ChambersUniversity of SheffieldVerified email at sheffield.ac.uk

Colin Semple

Professor/Head of Bioinformatics, MRC Human Genetics Unit, University of Edinburgh

Verified email at ed.ac.uk - Homepage

Bioinformatics genomics evolution


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The transcriptional landscape of the mammalian genome P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ... science 309 (5740), 1559-1563, 2005	3859	2005
An atlas of active enhancers across human cell types and tissues R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ... Nature 507 (7493), 455-461, 2014	2359	2014
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs RIKEN Genome Exploration Research Group Phase I Team: Carninci P. 2 Hayatsu ... Nature 420 (6915), 563-573, 2002	2046	2002
A promoter-level mammalian expression atlas Nature 507 (7493), 462-470, 2014	1548	2014
Disruption of two novel genes by a translocation co-segregating with schizophrenia JK Millar, JC Wilson-Annan, S Anderson, S Christie, MS Taylor, ... Human molecular genetics 9 (9), 1415-1423, 2000	1531	2000
Genome-wide analysis of mammalian promoter architecture and evolution P Carninci, A Sandelin, B Lenhard, S Katayama, K Shimokawa, ... Nature genetics 38 (6), 626-635, 2006	1522	2006
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020	1090	2020
Mutations in genes encoding ribonuclease H2 subunits cause Aicardi-Goutieres syndrome and mimic congenital viral brain infection YJ Crow, A Leitch, BE Hayward, A Garner, R Parmar, E Griffith, M Ali, ... Nature genetics 38 (8), 910-916, 2006	688	2006
Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21 A Tenesa, SM Farrington, JGD Prendergast, ME Porteous, M Walker, ... Nature genetics 40 (5), 631-637, 2008	666	2008
A high-resolution anatomical atlas of the transcriptome in the mouse embryo G Diez-Roux, S Banfi, M Sultan, L Geffers, S Anand, D Rozado, A Magen, ... PLoS biology 9 (1), e1000582, 2011	638	2011
Proteins containing the UBA domain are able to bind to multi-ubiquitin chains CRM Wilkinson, M Seeger, R Hartmann-Petersen, M Stone, M Wallace, ... Nature cell biology 3 (10), 939-943, 2001	521	2001
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line Nature genetics 41 (5), 553-562, 2009	472	2009
Posttranscriptional regulation of miRNAs harboring conserved terminal loops G Michlewski, S Guil, CA Semple, JF Cáceres Molecular cell 32 (3), 383-393, 2008	414	2008
Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation J Fraser, C Ferrai, AM Chiariello, M Schueler, T Rito, G Laudanno, ... Molecular systems biology 11 (12), 852, 2015	331	2015
Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages K Schroder, KM Irvine, MS Taylor, NJ Bokil, KA Le Cao, KA Masterman, ... Proceedings of the National Academy of Sciences 109 (16), E944-E953, 2012	309	2012
Common variation near CDKN1A, POLD3 and SHROOM2 influences colorectal cancer risk MG Dunlop, SE Dobbins, SM Farrington, AM Jones, C Palles, N Whiffin, ... Nature genetics 44 (7), 770-776, 2012	269	2012
POCUS: mining genomic sequence annotation to predict disease genes FS Turner, DR Clutterbuck, CAM Semple Genome biology 4, 1-9, 2003	268	2003
Two novel proteins recruited by synaptonemal complex protein 1 (SYCP1) are at the centre of meiosis Y Costa, R Speed, R Öllinger, M Alsheimer, CA Semple, P Gautier, ... Journal of cell science 118 (12), 2755-2762, 2005	246	2005
Dazl binds in vivo to specific transcripts and can regulate the pre-meiotic translation of Mvh in germ cells N Reynolds, B Collier, K Maratou, V Bingham, RM Speed, M Taggart, ... Human molecular genetics 14 (24), 3899-3909, 2005	221	2005
Genome-wide methylation profiling in Crohn's disease identifies altered epigenetic regulation of key host defense mechanisms including the Th17 pathway ER Nimmo, JG Prendergast, MC Aldhous, NA Kennedy, P Henderson, ... Inflammatory bowel diseases 18 (5), 889-899, 2012	188	2012

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