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Jeremy Goecks
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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
E Afgan, D Baker, B Batut, M Van Den Beek, D Bouvier, M Čech, J Chilton, ...
Nucleic acids research 46 (W1), W537-W544, 2018
43282018
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
J Goecks, A Nekrutenko, J Taylor, TG Team
Genome Biol 11 (8), R86, 2010
40432010
Method and system for usage analyzer that determines user accessed sources, indexes data subsets, and associated metadata, processing implicit queries based on potential …
ST Dumais, EJ Horvitz, EB Cutrell, JJ Cadiz, G Jancke, RK Sarin, ...
US Patent 7,162,473, 2007
6072007
Learning users' interests by unobtrusively observing their normal behavior
J Goecks, J Shavlik
Proceedings of the 5th international conference on Intelligent user …, 2000
2952000
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update
V Jalili, E Afgan, Q Gu, D Clements, D Blankenberg, J Goecks, J Taylor, ...
Nucleic acids research 48 (W1), W395-W402, 2020
2422020
The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution
O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ...
Cell 181 (2), 236-249, 2020
2252020
How machine learning will transform biomedicine
J Goecks, V Jalili, LM Heiser, JW Gray
Cell 181 (1), 92-101, 2020
1722020
Augmenting shared personal calendars
J Tullio, J Goecks, ED Mynatt, DH Nguyen
Proceedings of the 15th annual ACM symposium on User interface software and …, 2002
1132002
Practical computational reproducibility in the life sciences
B Grüning, J Chilton, J Köster, R Dale, N Soranzo, M van den Beek, ...
Cell systems 6 (6), 631-635, 2018
1052018
Charitable technologies: Opportunities for collaborative computing in nonprofit fundraising
J Goecks, A Voida, S Voida, ED Mynatt
Proceedings of the 2008 ACM conference on Computer supported cooperative …, 2008
942008
Integrative approach reveals composition of endoparasitoid wasp venoms
J Goecks, NT Mortimer, JA Mobley, GJ Bowersock, J Taylor, TA Schlenke
PloS one 8 (5), e64125, 2013
812013
A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer
AH Wagner, B Walsh, G Mayfield, D Tamborero, D Sonkin, K Krysiak, ...
Nature genetics 52 (4), 448-457, 2020
802020
Parasitoid wasp venom SERCA regulates Drosophila calcium levels and inhibits cellular immunity
NT Mortimer, J Goecks, BZ Kacsoh, JA Mobley, GJ Bowersock, J Taylor, ...
Proceedings of the National Academy of Sciences 110 (23), 9427-9432, 2013
672013
Leveraging social networks for information sharing
J Goecks, ED Mynatt
Proceedings of the 2004 ACM conference on Computer supported cooperative …, 2004
592004
T.(2010) Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
J Goecks, A Nekrutenko, J Taylor
Genome Biol 11 (8), R86, 0
58
Web-based visual analysis for high-throughput genomics
J Goecks, C Eberhard, T Too, A Nekrutenko, J Taylor
BMC genomics 14 (1), 1-11, 2013
522013
NuggetMine: Intelligent groupware for opportunistically sharing information nuggets
J Goecks, D Cosley
Proceedings of the 7th international conference on Intelligent user …, 2002
512002
MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging
D Schapiro, A Sokolov, C Yapp, YA Chen, JL Muhlich, J Hess, ...
Nature methods 19 (3), 311-315, 2022
502022
Challenges in supporting end-user privacy and security management with social navigation
J Goecks, WK Edwards, ED Mynatt
Proceedings of the 5th Symposium on Usable Privacy and Security, 5, 2009
482009
NGS analyses by visualization with Trackster
J Goecks, N Coraor, TG Team, A Nekrutenko, J Taylor
Nature biotechnology 30 (11), 1036-1039, 2012
412012
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Articles 1–20