Ewa Szczurek
Ewa Szczurek
Assistant Professor, University of Warsaw
Verified email at mimuw.edu.pl - Homepage
Cited by
Cited by
Modeling mutual exclusivity of cancer mutations
E Szczurek, N Beerenwinkel
International Conference on Research in Computational Molecular Biology, 307-308, 2014
TiMEx: a waiting time model for mutually exclusive cancer alterations
S Constantinescu, E Szczurek, P Mohammadi, J Rahnenführer, ...
Bioinformatics 32 (7), 968-975, 2016
Simultaneous analysis of large-scale RNAi screens for pathogen entry
P Rämö, A Drewek, C Arrieumerlou, N Beerenwinkel, H Ben-Tekaya, ...
BMC genomics 15 (1), 1162, 2014
Elucidating regulatory mechanisms downstream of a signaling pathway using informative experiments
E Szczurek, I Gat‐Viks, J Tiuryn, M Vingron
Molecular Systems Biology 5 (1), 2009
gespeR: a statistical model for deconvoluting off-target-confounded RNA interference screens
F Schmich, E Szczurek, S Kreibich, S Dilling, D Andritschke, A Casanova, ...
Genome biology 16 (1), 220, 2015
Comprehensive prediction in 78 human cell lines reveals rigidity and compactness of transcription factor dimers
A Jankowski, E Szczurek, R Jauch, J Tiuryn, S Prabhakar
Genome research 23 (8), 1307-1318, 2013
Synthetic sickness or lethality points at candidate combination therapy targets in glioblastoma
E Szczurek, N Misra, M Vingron
International journal of cancer 133 (9), 2123-2132, 2013
On subset seeds for protein alignment
M Roytberg, A Gambin, L Noé, S Lasota, E Furletova, E Szczurek, ...
IEEE/ACM Transactions on Computational Biology and Bioinformatics 6 (3), 483-494, 2009
Inferring the paths of somatic evolution in cancer
N Misra, E Szczurek, M Vingron
Bioinformatics 30 (17), 2456-2463, 2014
Predicting cancer type from tumour DNA signatures
KP Soh, E Szczurek, T Sakoparnig, N Beerenwinkel
Genome medicine 9 (1), 104, 2017
The R package bgmm: mixture modeling with uncertain knowledge
P Biecek, E Szczurek, M Vingron, J Tiuryn
Journal of Statistical Software 47 (i03), 2012
Putative type IV secretion genes in Bacillus anthracis
M Grynberg, Z Li, E Szczurek, A Godzik
Trends in microbiology 15 (5), 191-195, 2007
Inferring gene expression from ribosomal promoter sequences, a crowdsourcing approach
P Meyer, G Siwo, D Zeevi, E Sharon, R Norel, E Segal, G Stolovitzky, ...
Genome research 23 (11), 1928-1937, 2013
Rule tuning
E Makosa
Uppsala University, Sweden, 1-51, 2005
Introducing knowledge into differential expression analysis
E Szczurek, P Biecek, J Tiuryn, M Vingron
Journal of Computational Biology 17 (8), 953-967, 2010
Classification of peptide mass fingerprint data by novel no-regret boosting method
A Gambin, E Szczurek, J Dutkowski, M Bakun, M Dadlez
Computers in biology and medicine 39 (5), 460-473, 2009
Epistasis in genomic and survival data of cancer patients
D Matlak, E Szczurek
PLoS computational biology 13 (7), e1005626, 2017
An approach to mining data with continuous decision values
HS Nguyen, M Łuksza, E Mąkosa, HJ Komorowski
Intelligent Information Processing and Web Mining, 653-661, 2005
12 Grand challenges in single-cell data science
D Laehnemann, J Köster, E Szcureck, D McCarthy, SC Hicks, ...
PeerJ Preprints, 2019
Linear effects models of signaling pathways from combinatorial perturbation data
E Szczurek, N Beerenwinkel
Bioinformatics 32 (12), i297-i305, 2016
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