Ruy M Ribeiro
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Increased turnover of T lymphocytes in HIV-1 infection and its reduction by antiretroviral therapy
H Mohri, AS Perelson, K Tung, RM Ribeiro, B Ramratnam, M Markowitz, ...
The Journal of experimental medicine 194 (9), 1277-1288, 2001
Rapid emergence of protease inhibitor resistance in hepatitis C virus
L Rong, H Dahari, RM Ribeiro, AS Perelson
Science translational medicine 2 (30), 30ra32-30ra32, 2010
Acute loss of intestinal CD4+ T cells is not predictive of simian immunodeficiency virus virulence
IV Pandrea, R Gautam, RM Ribeiro, JM Brenchley, IF Butler, M Pattison, ...
The Journal of Immunology 179 (5), 3035-3046, 2007
Analysis of hepatitis B viral load decline under potent therapy: complex decay profiles observed
SR Lewin, RM Ribeiro, T Walters, GK Lau, S Bowden, S Locarnini, ...
Hepatology 34 (5), 1012-1020, 2001
In vivo dynamics of T cell activation, proliferation, and death in HIV-1 infection: why are CD4+ but not CD8+ T cells depleted?
RM Ribeiro, H Mohri, DD Ho, AS Perelson
Proceedings of the National Academy of Sciences 99 (24), 15572-15577, 2002
Estimation of the initial viral growth rate and basic reproductive number during acute HIV-1 infection
RM Ribeiro, L Qin, LL Chavez, D Li, SG Self, AS Perelson
Journal of virology 84 (12), 6096-6102, 2010
Production of resistant HIV mutants during antiretroviral therapy
RM Ribeiro, S Bonhoeffer
Proceedings of the National Academy of Sciences 97 (14), 7681-7686, 2000
Viral dynamics and response differences in HCV‐infected African American and white patients treated with IFN and ribavirin
JE Layden‐Almer, RM Ribeiro, T Wiley, AS Perelson, TJ Layden
Hepatology 37 (6), 1343-1350, 2003
Modeling the within-host dynamics of HIV infection
AS Perelson, RM Ribeiro
BMC biology 11 (1), 96, 2013
Real time bayesian estimation of the epidemic potential of emerging infectious diseases
LMA Bettencourt, RM Ribeiro
PLoS One 3 (5), e2185, 2008
HIV persistence in tissue macrophages of humanized myeloid-only mice during antiretroviral therapy
JB Honeycutt, WO Thayer, CE Baker, RM Ribeiro, SM Lada, Y Cao, ...
Nature medicine 23 (5), 638-643, 2017
Modeling the mechanisms of acute hepatitis B virus infection
SM Ciupe, RM Ribeiro, PW Nelson, AS Perelson
Journal of theoretical biology 247 (1), 23-35, 2007
Trypanosoma brucei Parasites Occupy and Functionally Adapt to the Adipose Tissue in Mice
S Trindade, F Rijo-Ferreira, T Carvalho, D Pinto-Neves, F Guegan, ...
Cell host & microbe 19 (6), 837-848, 2016
Kinetics of coinfection with influenza A virus and Streptococcus pneumoniae
AM Smith, FR Adler, RM Ribeiro, RN Gutenkunst, JL McAuley, ...
PLoS Pathog 9 (3), e1003238, 2013
Dynamics of hepatitis B virus infection
RM Ribeiro, A Lo, AS Perelson
Microbes and Infection 4 (8), 829-835, 2002
The level of monocyte turnover predicts disease progression in the macaque model of AIDS
A Hasegawa, H Liu, B Ling, JT Borda, X Alvarez, C Sugimoto, ...
Blood, The Journal of the American Society of Hematology 114 (14), 2917-2925, 2009
CD8+ lymphocytes control viral replication in SIVmac239-infected rhesus macaques without decreasing the lifespan of productively infected cells
NR Klatt, E Shudo, AM Ortiz, JC Engram, M Paiardini, B Lawson, ...
PLoS Pathog 6 (1), e1000747, 2010
Modeling hepatitis C virus dynamics: liver regeneration and critical drug efficacy
H Dahari, A Lo, RM Ribeiro, AS Perelson
Journal of theoretical biology 247 (2), 371-381, 2007
The frequency of resistant mutant virus before antiviral therapy
RM Ribeiro, S Bonhoeffer, MA Nowak
Aids 12 (5), 461-465, 1998
Quantifying the diversification of hepatitis C virus (HCV) during primary infection: estimates of the in vivo mutation rate
RM Ribeiro, H Li, S Wang, MB Stoddard, GH Learn, BT Korber, ...
PLoS Pathog 8 (8), e1002881, 2012
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