Felix Naef
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Circadian gene expression in individual fibroblasts: cell-autonomous and self-sustained oscillators pass time to daughter cells
E Nagoshi, C Saini, C Bauer, T Laroche, F Naef, U Schibler
Cell 119 (5), 693-705, 2004
Mammalian genes are transcribed with widely different bursting kinetics
DM Suter, N Molina, D Gatfield, K Schneider, U Schibler, F Naef
science 332 (6028), 472-474, 2011
Molecular signature of human embryonic stem cells and its comparison with the mouse
N Sato, IM Sanjuan, M Heke, M Uchida, F Naef, AH Brivanlou
Developmental biology 260 (2), 404-413, 2003
Transport and conservation laws
X Zotos, F Naef, P Prelovsek
Physical Review B 55 (17), 11029, 1997
Circadian regulation of gene expression systems in the Drosophila head
A Claridge-Chang, H Wijnen, F Naef, C Boothroyd, N Rajewsky, ...
Neuron 32 (4), 657-671, 2001
Genome-wide and phase-specific DNA-binding rhythms of BMAL1 control circadian output functions in mouse liver
G Rey, F Cesbron, J Rougemont, H Reinke, M Brunner, F Naef
PLoS biology 9 (2), e1000595, 2011
The nodal precursor acting via activin receptors induces mesoderm by maintaining a source of its convertases and BMP4
N Ben-Haim, C Lu, M Guzman-Ayala, L Pescatore, D Mesnard, ...
Developmental cell 11 (3), 313-323, 2006
Circadian clock-dependent and-independent rhythmic proteomes implement distinct diurnal functions in mouse liver
D Mauvoisin, J Wang, C Jouffe, E Martin, F Atger, P Waridel, M Quadroni, ...
Proceedings of the National Academy of Sciences 111 (1), 167-172, 2014
The circadian clock coordinates ribosome biogenesis
C Jouffe, G Cretenet, L Symul, E Martin, F Atger, F Naef, F Gachon
PLoS biology 11 (1), e1001455, 2013
Cold-inducible RNA-binding protein modulates circadian gene expression posttranscriptionally
J Morf, G Rey, K Schneider, M Stratmann, J Fujita, F Naef, U Schibler
Science 338 (6105), 379-383, 2012
Chemotaxis behavior mediated by single larval olfactory neurons in Drosophila
E Fishilevich, AI Domingos, K Asahina, F Naef, LB Vosshall, M Louis
Current biology 15 (23), 2086-2096, 2005
Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays
F Naef, MO Magnasco
Physical Review E 68 (1), 011906, 2003
A self-regulatory system of interlinked signaling feedback loops controls mouse limb patterning
JD Bénazet, M Bischofberger, E Tiecke, A Gonçalves, JF Martin, A Zuniga, ...
Science 323 (5917), 1050-1053, 2009
Guidelines for genome-scale analysis of biological rhythms
ME Hughes, KC Abruzzi, R Allada, R Anafi, AB Arpat, G Asher, P Baldi, ...
Journal of biological rhythms 32 (5), 380-393, 2017
Circadian and feeding rhythms differentially affect rhythmic mRNA transcription and translation in mouse liver
F Atger, C Gobet, J Marquis, E Martin, J Wang, B Weger, G Lefebvre, ...
Proceedings of the National Academy of Sciences 112 (47), E6579-E6588, 2015
The mouse microbiome is required for sex-specific diurnal rhythms of gene expression and metabolism
BD Weger, C Gobet, J Yeung, E Martin, S Jimenez, B Betrisey, F Foata, ...
Cell metabolism 29 (2), 362-382. e8, 2019
Robust synchronization of coupled circadian and cell cycle oscillators in single mammalian cells
J Bieler, R Cannavo, K Gustafson, C Gobet, D Gatfield, F Naef
Molecular systems biology 10 (7), 739, 2014
Absolute mRNA concentrations from sequence‐specific calibration of oligonucleotide arrays
D Hekstra, AR Taussig, M Magnasco, F Naef
Nucleic acids research 31 (7), 1962-1968, 2003
Genome-wide RNA polymerase II profiles and RNA accumulation reveal kinetics of transcription and associated epigenetic changes during diurnal cycles
G Le Martelot, D Canella, L Symul, E Migliavacca, F Gilardi, R Liechti, ...
PLoS biology 10 (11), e1001442, 2012
Integration of Light and Temperature in the Regulation of Circadian Gene Expression in Drosophila
CE Boothroyd, H Wijnen, F Naef, L Saez, MW Young
PLoS genetics 3 (4), e54, 2007
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