| The khmer software package: enabling efficient nucleotide sequence analysis [version 1; referees: 2 approved, 1 approved with reservations] MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | 334 | 2015 |
| Population genomics of parallel hybrid zones in the mimetic butterflies, H. melpomene and H. erato NJ Nadeau, M Ruiz, P Salazar, B Counterman, JA Medina, ... Genome research 24 (8), 1316-1333, 2014 | 128 | 2014 |
| Gene expression profiling of intestinal regeneration in the sea cucumber PA Ortiz-Pineda, F Ramírez-Gómez, J Pérez-Ortiz, S González-Díaz, ... BMC genomics 10 (1), 1-21, 2009 | 122 | 2009 |
| patternize: An R package for quantifying colour pattern variation SM Van Belleghem, R Papa, H Ortiz‐Zuazaga, F Hendrickx, CD Jiggins, ... Methods in Ecology and Evolution 9 (2), 390-398, 2018 | 88 | 2018 |
| Bacterial community in the crop of the hoatzin, a neotropical folivorous flying bird F Godoy-Vitorino, RE Ley, Z Gao, Z Pei, H Ortiz-Zuazaga, LR Pericchi, ... Applied and environmental microbiology 74 (19), 5905-5912, 2008 | 86 | 2008 |
| Hippocampal gene expression profiling in spatial discrimination learning Y Robles, PE Vivas-Mejı́a, HG Ortiz-Zuazaga, J Félix, X Ramos, ... Neurobiology of learning and memory 80 (1), 80-95, 2003 | 75 | 2003 |
| Gene expression profile of the regeneration epithelium during axolotl limb regeneration LJ Campbell, EC Suárez‐Castillo, H Ortiz‐Zuazaga, D Knapp, EM Tanaka, ... Developmental Dynamics 240 (7), 1826-1840, 2011 | 71 | 2011 |
| Distinct profiles of expressed sequence tags during intestinal regeneration in the sea cucumber Holothuria glaberrima C Rojas-Cartagena, P Ortíz-Pineda, F Ramírez-Gómez, ... Physiological genomics 31 (2), 203-215, 2007 | 71 | 2007 |
| Genomics overrules mitochondrial DNA, siding with morphology on a controversial case of species delimitation CR Pedraza-Marrón, R Silva, J Deeds, SM Van Belleghem, ... Proceedings of the Royal Society B 286 (1900), 20182924, 2019 | 40 | 2019 |
| Platelet-derived TLT-1 is a prognostic indicator in ALI/ARDS and prevents tissue damage in the lungs in a mouse model J Morales-Ortíz, V Deal, F Reyes, G Maldonado-Martínez, N Ledesma, ... Blood, The Journal of the American Society of Hematology 132 (23), 2495-2505, 2018 | 35 | 2018 |
| MicroRNA-27a distinguishes glioblastoma multiforme from diffuse and anaplastic astrocytomas and has prognostic value M Rivera-Díaz, MA Miranda-Román, D Soto, M Quintero-Aguilo, ... American journal of cancer research 5 (1), 201, 2015 | 31 | 2015 |
| The khmer software package: enabling efficient nucleotide sequence analysis. F1000Res 4: 900 MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | 27 | 2015 |
| The khmer software package: enabling efficient sequence analysis M Crusoe, G Edvenson, J Fish, A Howe, E McDonald, J Nahum, ... URL http://dx. doi. org/10.6084/m9. figshare 979190, 2014 | 26 | 2014 |
| Andrographolide induces DNA damage in prostate cancer cells IS Forestier-Román, A López-Rivas, MM Sánchez-Vázquez, ... Oncotarget 10 (10), 1085, 2019 | 22 | 2019 |
| Genome‐wide expression profiling of the osmoadaptation response of Debaryomyces hansenii NA Gonzalez, A Vázquez, HG Ortiz Zuazaga, A Sen, HL Olvera, ... Yeast 26 (2), 111-124, 2009 | 21 | 2009 |
| Identification of flap structure-specific endonuclease 1 as a factor involved in long-term memory formation of aversive learning L Saavedra-Rodríguez, A Vázquez, HG Ortiz-Zuazaga, NE Chorna, ... Journal of Neuroscience 29 (18), 5726-5737, 2009 | 16 | 2009 |
| Transcriptomic analysis of early stages of intestinal regeneration in Holothuria glaberrima DJ Quispe-Parra, JG Medina-Feliciano, S Cruz-González, ... Scientific Reports 11 (1), 1-14, 2021 | 15 | 2021 |
| The khmer software package: enabling efficient nucleotide sequence analysis. F1000Research 4, 900 MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | 9 | 2015 |
| Toa: A web based network flow data monitoring system at scale J Ortiz-Ubarri, H Ortiz-Zuazaga, A Maldonado, E Santos, J Grullón 2015 IEEE International Congress on Big Data, 438-443, 2015 | 7 | 2015 |
| khmer k-mer counting & filtering FTW MR Crusoe, G Edvenson, J Fish, A Howe, L Irber, E McDonald, J Nahum, ... h ttps://github. com/ctb/khmer, 2014 | 7 | 2014 |
