Izaskun Mallona
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Validation of reference genes for quantitative real-time PCR during leaf and flower development in Petunia hybrida
I Mallona, S Lischewski, J Weiss, B Hause, M Egea-Cortines
BMC Plant Biology 10 (1), 4, 2010
Wanderer, an interactive viewer to explore DNA methylation and gene expression data in human cancer
A Díez-Villanueva, I Mallona, MA Peinado
Epigenetics & Chromatin 8 (22), 2015
Aging-like spontaneous epigenetic silencing facilitates Wnt activation, stemness, and BrafV600E-induced tumorigenesis
Y Tao, B Kang, DA Petkovich, YR Bhandari, J In, G Stein-O'Brien, X Kong, ...
Cancer cell 35 (2), 315-328. e6, 2019
Long-term self-renewing stem cells in the adult mouse hippocampus identified by intravital imaging
S Bottes, BN Jaeger, GA Pilz, DJ Jörg, JD Cole, M Kruse, L Harris, ...
Nature neuroscience 24 (2), 225-233, 2021
pcrEfficiency: a Web tool for PCR amplification efficiency prediction
I Mallona, J Weiss, M Egea-Cortines
BMC Bioinformatics 12 (1), 404, 2011
Methylation plotter: a web tool for dynamic visualization of DNA methylation data
I Mallona, A Díez-Villanueva, MA Peinado
Source code for biology and medicine 9, 1-5, 2014
Conserved and Divergent Rhythms of Crassulacean Acid Metabolism-Related and Core Clock Gene Expression in the Cactus Opuntia ficus-indica
I Mallona, M Egea-Cortines, J Weiss
Plant Physiology 156 (4), 1978-1989, 2011
The epigenetic landscape of Alu repeats delineates the structural and functional genomic architecture of colon cancer cells
M Jordà, A Díez-Villanueva, I Mallona, B Martín, S Lois, V Barrera, ...
Genome Research 27 (1), 118-132, 2017
Deconstruction of DNA Methylation Patterns During Myogenesis Reveals Specific Epigenetic Events in the Establishment of the Skeletal Muscle Lineage
E Carrió, A Díez‐Villanueva, S Lois, I Mallona, I Cases, M Forn, ...
Stem Cells, 2015
Flanking sequence preference modulates de novo DNA methylation in the mouse genome
I Mallona, IM Ilie, ID Karemaker, S Butz, M Manzo, A Caflisch, T Baubec
Nucleic acids research 49 (1), 145-157, 2021
Quantification of unmethylated Alu (QUAlu): a tool to assess global hypomethylation in routine clinical samples
R Buj, I Mallona, A Díez-Villanueva, V Barrera, D Mauricio, ...
Oncotarget 7 (9), 10536, 2016
Chainy: an universal tool for standardized relative quantification in real-time PCR
I Mallona, A Díez-Villanueva, B Martín, MA Peinado
Bioinformatics 33 (9), 1411-1413, 2017
Kallikreins stepwise scoring reveals three subtypes of papillary thyroid cancer with prognostic implications
R Buj, I Mallona, A Diez-Villanueva, C Zafon, JL Mate, M Roca, ...
Thyroid 28 (5), 601-612, 2018
Loss of TDP‐43 oligomerization or RNA binding elicits distinct aggregation patterns
M Pérez‐Berlanga, VI Wiersma, A Zbinden, L De Vos, U Wagner, ...
The EMBO Journal, e111719, 2023
The Pancancer DNA methylation trackhub: a window to the cancer genome atlas epigenomics data
I Mallona, A Sierco, MA Peinado
CpG Islands: Methods and Protocols, 123-135, 2018
Truke, a web tool to check for and handle excel misidentified gene symbols
I Mallona, MA Peinado
BMC genomics 18, 1-3, 2017
Meta-analysis of (single-cell method) benchmarks reveals the need for extensibility and interoperability
A Sonrel, A Luetge, C Soneson, I Mallona, PL Germain, S Knyazev, J Gilis, ...
Genome Biology 24 (1), 119, 2023
A knowledgebase of the human Alu repetitive elements
I Mallona, M Jordà, MA Peinado
Journal of Biomedical Informatics 60, 77-83, 2016
Genotyping Antirrhinum commercial varieties using miniature inverted-repeat transposable elements (MITEs)
J Weiss, I Mallona, P Gomez-di-Marco, JM Fernández-Valera, ...
Scientia Horticulturae 144, 161-167, 2012
DNA co-methylation networks outline the structure and remodeling dynamics of colorectal cancer epigenome
I Mallona, S Aussó, A Díez-Villanueva, V Moreno, MA Peinado
bioRxiv, 2020
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Articles 1–20