Daniel Zerbino
Title
Cited by
Cited by
Year
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
DR Zerbino, E Birney
Genome research 18 (5), 821-829, 2008
97522008
Comprehensive molecular characterization of human colon and rectal cancer
Cancer Genome Atlas Network
Nature 487 (7407), 330, 2012
51132012
Ensembl 2012
P Flicek, MR Amode, D Barrell, K Beal, S Brent, D Carvalho-Silva, ...
Nucleic acids research, gkr991, 2011
44292011
Comprehensive genomic characterization of squamous cell lung cancers
Cancer Genome Atlas Research Network
Nature 489 (7417), 519, 2012
26882012
Ensembl 2018
DR Zerbino, P Achuthan, W Akanni, MR Amode, D Barrell, J Bhai, K Billis, ...
Nucleic acids research 46 (D1), D754-D761, 2018
21922018
Ensembl 2015
F Cunningham, MR Amode, D Barrell, K Beal, K Billis, S Brent, ...
Nucleic acids research 43 (D1), D662-D669, 2015
15282015
Ensembl 2016
A Yates, W Akanni, MR Amode, D Barrell, K Billis, D Carvalho-Silva, ...
Nucleic acids research 44 (D1), D710-D716, 2016
14412016
Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
MH Schulz, DR Zerbino, M Vingron, E Birney
Bioinformatics 28 (8), 1086-1092, 2012
14382012
Genetic effects on gene expression across human tissues
GTEx Consortium
Nature 550 (7675), 204, 2017
13912017
GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
9602019
Ensembl 2020
AD Yates, P Achuthan, W Akanni, J Allen, J Allen, J Alvarez-Jarreta, ...
Nucleic acids research 48 (D1), D682-D688, 2020
6022020
Lineage-specific genome architecture links enhancers and non-coding disease variants to target gene promoters
BM Javierre, OS Burren, SP Wilder, R Kreuzhuber, SM Hill, S Sewitz, ...
Cell 167 (5), 1369-1384. e19, 2016
5902016
Assessment of transcript reconstruction methods for RNA-seq
T Steijger, JF Abril, PG Engstr÷m, F Kokocinski, TJ Hubbard, R Guigˇ, ...
Nature methods 10 (12), 1177-1184, 2013
5522013
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
5522011
Ensembl 2019
F Cunningham, P Achuthan, W Akanni, J Allen, MR Amode, IM Armean, ...
Nucleic acids research 47 (D1), D745-D751, 2019
5372019
Using the Velvet de novo Assembler for Short‐Read Sequencing Technologies
DR Zerbino
Current protocols in bioinformatics 31 (1), 11.5. 1-11.5. 12, 2010
5282010
Ensembl 2017
BL Aken, P Achuthan, W Akanni, MR Amode, F Bernsdorff, J Bhai, K Billis, ...
Nucleic acids research 45 (D1), D635-D642, 2017
4912017
Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS Genet 6 (2), e1000841, 2010
4052010
The ensembl regulatory build
DR Zerbino, SP Wilder, N Johnson, T Juettemann, PR Flicek
Genome biology 16 (1), 1-8, 2015
3072015
The International Human Epigenome Consortium: a blueprint for scientific collaboration and discovery
HG Stunnenberg, S Abrignani, D Adams, M de Almeida, L Altucci, V Amin, ...
Cell 167 (5), 1145-1149, 2016
2982016
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