Hedi Peterson
Hedi Peterson
Professor of Bioinformatics, University of Tartu; ELIXIR Estonia;
Verified email at
Cited by
Cited by
g: Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)
U Raudvere, L Kolberg, I Kuzmin, T Arak, P Adler, H Peterson, J Vilo
Nucleic acids research, 2019
g: Profiler—a web-based toolset for functional profiling of gene lists from large-scale experiments
J Reimand, M Kull, H Peterson, J Hansen, J Vilo
Nucleic acids research 35 (suppl 2), W193-W200, 2007
g: Profiler—a web server for functional interpretation of gene lists (2016 update)
J Reimand, T Arak, P Adler, L Kolberg, S Reisberg, H Peterson, J Vilo
Nucleic acids research, gkw199, 2016
gprofiler2--an R package for gene list functional enrichment analysis and namespace conversion toolset g: Profiler
L Kolberg, U Raudvere, I Kuzmin, J Vilo, H Peterson
F1000Research 9, 2020
AIRE-deficient patients harbor unique high-affinity disease-ameliorating autoantibodies
S Meyer, M Woodward, C Hertel, P Vlaicu, Y Haque, J Kärner, A Macagno, ...
Cell 166 (3), 582-595, 2016
Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach
AK Krug, R Kolde, JA Gaspar, E Rempel, NV Balmer, K Meganathan, ...
Archives of toxicology 87 (1), 123-143, 2013
Mining for coexpression across hundreds of datasets using novel rank aggregation and visualization methods
P Adler, R Kolde, M Kull, A Tkachenko, H Peterson, J Reimand, J Vilo
Genome biology 10 (12), R139, 2009
Tools and data services registry: a community effort to document bioinformatics resources
J Ison, K Rapacki, H Ménager, M Kalaš, E Rydza, P Chmura, C Anthon, ...
Nucleic acids research 44 (D1), D38-D47, 2016
MicroRNA Expression Profiles of Human Blood Monocyte-derived Dendritic Cells and Macrophages Reveal miR-511 as Putative Positive Regulator of Toll-like Receptor 4
L Tserel, T Runnel, K Kisand, M Pihlap, L Bakhoff, R Kolde, H Peterson, ...
Journal of Biological Chemistry 286 (30), 26487-26495, 2011
GraphWeb: mining heterogeneous biological networks for gene modules with functional significance
J Reimand, L Tooming, H Peterson, P Adler, J Vilo
Nucleic acids research 36 (suppl 2), W452-W459, 2008
A data integration approach to mapping OCT4 gene regulatory networks operative in embryonic stem cells and embryonal carcinoma cells
M Jung, H Peterson, L Chavez, P Kahlem, H Lehrach, J Vilo, J Adjaye
PloS one 5 (5), e10709, 2010
Longitudinal proteomic profiling reveals increased early inflammation and sustained apoptosis proteins in severe COVID-19
L Haljasmägi, A Salumets, AP Rumm, M Jürgenson, E Krassohhina, ...
Scientific reports 10 (1), 1-12, 2020
g: Profiler—interoperable web service for functional enrichment analysis and gene identifier mapping (2023 update)
L Kolberg, U Raudvere, I Kuzmin, P Adler, J Vilo, H Peterson
Nucleic Acids Research, gkad347, 2023
The bio. tools registry of software tools and data resources for the life sciences
J Ison, H Ienasescu, P Chmura, E Rydza, H Ménager, M Kalaš, ...
Genome biology 20 (1), 1-4, 2019
Genome-wide promoter analysis of histone modifications in human monocyte-derived antigen presenting cells
L Tserel, R Kolde, A Rebane, K Kisand, T Org, H Peterson, J Vilo, ...
BMC genomics 11 (1), 642, 2010
C-reactive protein upregulates the whole blood expression of CD59-an integrative analysis
K Lepik, T Annilo, V Kukuškina, K Kisand, Z Kutalik, P Peterson, ...
PLOS Computational Biology 13 (9), e1005766, 2017
Comprehensive transcriptome analysis of mouse embryonic stem cell adipogenesis unravels new processes of adipocyte development
N Billon, R Kolde, J Reimand, MC Monteiro, M Kull, H Peterson, ...
Genome biology 11 (8), 1-16, 2010
Autoantibody repertoire in APECED patients targets two distinct subgroups of proteins
D Fishman, K Kisand, C Hertel, M Rothe, A Remm, M Pihlap, P Adler, ...
Frontiers in Immunology 8, 976, 2017
Endometrial transcriptome analysis indicates superiority of natural over artificial cycles in recurrent implantation failure patients undergoing frozen embryo transfer
S Altmäe, K Tamm-Rosenstein, FJ Esteban, J Simm, L Kolberg, ...
Reproductive BioMedicine Online, 2016
Signs of innate immune activation and premature immunosenescence in psoriasis patients
L Šahmatova, E Sügis, M Šunina, H Hermann, E Prans, M Pihlap, ...
Scientific Reports 7, 2017
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