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Piet Jones
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Plant host-associated mechanisms for microbial selection
P Jones, BJ Garcia, A Furches, GA Tuskan, D Jacobson
Frontiers in Plant Science 10, 452782, 2019
1662019
Transcript, protein and metabolite temporal dynamics in the CAM plant Agave
PE Abraham, H Yin, AM Borland, D Weighill, SD Lim, HC De Paoli, ...
Nature Plants 2 (12), 1-10, 2016
1472016
Potentially adaptive SARS-CoV-2 mutations discovered with novel spatiotemporal and explainable AI models
MR Garvin, E T. Prates, M Pavicic, P Jones, BK Amos, A Geiger, MB Shah, ...
Genome biology 21, 1-26, 2020
632020
Fungal-bacterial networks in the Populus rhizobiome are impacted by soil properties and host genotype
G Bonito, GMN Benucci, K Hameed, D Weighill, P Jones, KH Chen, ...
Frontiers in Microbiology 10, 434794, 2019
482019
Genus-wide assessment of lignocellulose utilization in the extremely thermophilic genus Caldicellulosiruptor by genomic, pangenomic, and metagenomic analyses
LL Lee, SE Blumer-Schuette, JA Izquierdo, JV Zurawski, AJ Loder, ...
Applied and environmental microbiology 84 (9), e02694-17, 2018
452018
Defining the genetic components of callus formation: A GWAS approach
GA Tuskan, R Mewalal, LE Gunter, KJ Palla, K Carter, DA Jacobson, ...
PLoS One 13 (8), e0202519, 2018
382018
High throughput screening technologies in biomass characterization
SR Decker, AE Harman-Ware, RM Happs, EJ Wolfrum, GA Tuskan, ...
Frontiers in Energy Research 6, 120, 2018
312018
Pleiotropic and epistatic network-based discovery: integrated networks for target gene discovery
D Weighill, P Jones, M Shah, P Ranjan, W Muchero, J Schmutz, ...
Frontiers in Energy Research 6, 30, 2018
262018
Phytobiome and Transcriptional Adaptation of Populus deltoides to Acute Progressive Drought and Cyclic Drought
BJ Garcia, JL Labbé, P Jones, PE Abraham, I Hodge, S Climer, S Jawdy, ...
Phytobiomes journal 2 (4), 249-260, 2018
262018
Neurotransmitter networks in mouse prefrontal cortex are reconfigured by isoflurane anesthesia
X Zhang, AG Baer, JM Price, PC Jones, BJ Garcia, J Romero, AM Cliff, ...
Journal of neurophysiology 123 (6), 2285-2296, 2020
252020
Multi-phenotype association decomposition: unraveling complex gene-phenotype relationships
D Weighill, P Jones, C Bleker, P Ranjan, M Shah, N Zhao, M Martin, ...
Frontiers in Genetics 10, 417, 2019
242019
Potential pathogenicity determinants identified from structural proteomics of SARS-CoV and SARS-CoV-2
ET Prates, MR Garvin, M Pavicic, P Jones, M Shah, O Demerdash, ...
Molecular biology and evolution 38 (2), 702-715, 2021
232021
Genome-Wide Association Study of Wood Anatomical and Morphological Traits in Populus trichocarpa
HB Chhetri, A Furches, D Macaya-Sanz, AR Walker, D Kainer, P Jones, ...
Frontiers in plant science 11, 545748, 2020
232020
Polypharmacy-associated risk of hospitalisation among people ageing with and without HIV: an observational study
AC Justice, KS Gordon, J Romero, EJ Edelman, BJ Garcia, P Jones, ...
The Lancet Healthy Longevity 2 (10), e639-e650, 2021
212021
Image-Based Methods to Score Fungal Pathogen Symptom Progression and Severity in Excised Arabidopsis Leaves
M Pavicic, K Overmyer, AU Rehman, P Jones, D Jacobson, K Himanen
Plants 10 (1), 158, 2021
202021
Epigenetic effects of paternal cocaine on reward stimulus behavior and accumbens gene expression in mice
AM Yaw, RA Prosser, PC Jones, BJ Garcia, DA Jacobson, JD Glass
Behavioural Brain Research 367, 68-81, 2019
172019
Finding new cell wall regulatory genes in Populus trichocarpa using multiple lines of evidence
A Furches, D Kainer, D Weighill, A Large, P Jones, AM Walker, J Romero, ...
Frontiers in Plant Science 10, 454475, 2019
152019
Evaluating the performance of random forest and iterative random forest based methods when applied to gene expression data
AM Walker, A Cliff, J Romero, MB Shah, P Jones, JGFM Gazolla, ...
Computational and Structural Biotechnology Journal 20, 3372-3386, 2022
132022
Identification of novel, replicable genetic risk loci for suicidal thoughts and behaviors among US military veterans
NA Kimbrel, AE Ashley-Koch, XJ Qin, JH Lindquist, ME Garrett, ...
JAMA psychiatry 80 (2), 135-145, 2023
112023
A k-mer based approach for classifying viruses without taxonomy identifies viral associations in human autism and plant microbiomes
BJ Garcia, R Simha, M Garvin, A Furches, P Jones, JGFM Gazolla, ...
Computational and structural biotechnology journal 19, 5911-5919, 2021
112021
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Articles 1–20