A. Ercument Cicek
A. Ercument Cicek
Assistant Professor, Bilkent University; Adj. Faculty Member, Carnegie Mellon University
Adresse e-mail validée de cs.bilkent.edu.tr - Page d'accueil
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Synaptic, transcriptional and chromatin genes disrupted in autism
S De Rubeis, X He, AP Goldberg, CS Poultney, K Samocha, AE Cicek, ...
Nature 515 (7526), 209-215, 2014
17972014
Insights into autism spectrum disorder genomic architecture and biology from 71 risk loci
SJ Sanders, X He, AJ Willsey, AG Ercan-Sencicek, KE Samocha, ...
Neuron 87 (6), 1215-1233, 2015
8932015
Gene expression elucidates functional impact of polygenic risk for schizophrenia
M Fromer, P Roussos, SK Sieberts, JS Johnson, DH Kavanagh, ...
Nature neuroscience 19 (11), 1442-1453, 2016
6122016
Large-scale exome sequencing study implicates both developmental and functional changes in the neurobiology of autism
FK Satterstrom, JA Kosmicki, J Wang, MS Breen, S De Rubeis, JY An, ...
Cell 180 (3), 568-584. e23, 2020
3782020
DAWN: a framework to identify autism genes and subnetworks using gene expression and genetics
L Liu, J Lei, SJ Sanders, AJ Willsey, Y Kou, AE Cicek, L Klei, C Lu, X He, ...
Molecular autism 5 (1), 1-18, 2014
1042014
Landscape of conditional eQTL in dorsolateral prefrontal cortex and co-localization with schizophrenia GWAS
A Dobbyn, LM Huckins, J Boocock, LG Sloofman, BS Glicksberg, ...
The American Journal of Human Genetics 102 (6), 1169-1184, 2018
662018
Ensuring location diversity in privacy-preserving spatio-temporal data publishing
AE Cicek, ME Nergiz, Y Saygin
The VLDB Journal 23 (4), 609-625, 2014
642014
Metabolome profiling by HRMAS NMR spectroscopy of pheochromocytomas and paragangliomas detects SDH deficiency: clinical and pathophysiological implications
A Imperiale, FM Moussallieh, P Roche, S Battini, AE Cicek, F Sebag, ...
Neoplasia 17 (1), 55-65, 2015
492015
Metabolomics approaches in pancreatic adenocarcinoma: tumor metabolism profiling predicts clinical outcome of patients
S Battini, F Faitot, A Imperiale, AE Cicek, C Heimburger, G Averous, ...
BMC medicine 15 (1), 1-16, 2017
352017
Novel genes for autism implicate both excitatory and inhibitory cell lineages in risk
FK Satterstrom, JA Kosmicki, J Wang, MS Breen, S De Rubeis, JY An, ...
bioRxiv, 484113, 2018
312018
Re-identification of individuals in genomic data-sharing beacons via allele inference
N Von Thenen, E Ayday, AE Cicek
Bioinformatics 35 (3), 365-371, 2019
242019
Whole-genome and RNA sequencing reveal variation and transcriptomic coordination in the developing human prefrontal cortex
DM Werling, S Pochareddy, J Choi, JY An, B Sheppard, M Peng, Z Li, ...
Cell reports 31 (1), 107489, 2020
222020
A look-ahead approach to secure multiparty protocols
ME Nergiz, E Cicek, T Pedersen, Y Saygin
IEEE Transactions on Knowledge and Data Engineering 24 (7), 1170-1185, 2011
222011
State MW (2015)
SJ Sanders, X He, AJ Willsey, AG Ercan‐Sencicek, KE Samocha, ...
Insights into autism spectrum disorder genomic architecture and biology from …, 0
22
ADEMA: an algorithm to determine expected metabolite level alterations using mutual information
AE Cicek, I Bederman, L Henderson, ML Drumm, G Ozsoyoglu
PLoS Comput Biol 9 (1), e1002859, 2013
192013
DDD Study
S De Rubeis, X He, AP Goldberg, CS Poultney, K Samocha, AE Cicek, ...
Homozygosity Mapping Collaborative for Autism, 209-215, 0
16
Detailed modeling of positive selection improves detection of cancer driver genes
S Zhao, J Liu, P Nanga, Y Liu, AE Cicek, N Knoblauch, C He, M Stephens, ...
Nature communications 10 (1), 1-13, 2019
152019
A statistical framework for mapping risk genes from de novo mutations in whole-genome-sequencing studies
Y Liu, Y Liang, AE Cicek, Z Li, J Li, RA Muhle, M Krenzer, Y Mei, Y Wang, ...
The American Journal of Human Genetics 102 (6), 1031-1047, 2018
152018
Hercules: a profile HMM-based hybrid error correction algorithm for long reads
C Firtina, Z Bar-Joseph, C Alkan, AE Cicek
Nucleic acids research 46 (21), e125-e125, 2018
142018
An online model composition tool for system biology models
SA Coskun, AE Cicek, N Lai, RK Dash, ZM Ozsoyoglu, G Ozsoyoglu
BMC systems biology 7 (1), 1-15, 2013
132013
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