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Mattia Conte
Mattia Conte
UniversitÓ di Napoli "Federico II"
Verified email at na.infn.it
Title
Cited by
Cited by
Year
Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation
N Kubo, H Ishii, X Xiong, S Bianco, F Meitinger, R Hu, JD Hocker, ...
Nature structural & molecular biology 28 (2), 152-161, 2021
2072021
CTCF mediates dosage-and sequence-context-dependent transcriptional insulation by forming local chromatin domains
H Huang, Q Zhu, A Jussila, Y Han, B Bintu, C Kern, M Conte, Y Zhang, ...
Nature genetics 53 (7), 1064-1074, 2021
1022021
Polymer physics indicates chromatin folding variability across single-cells results from state degeneracy in phase separation
M Conte, L Fiorillo, S Bianco, AM Chiariello, A Esposito, M Nicodemi
Nature communications 11 (1), 3289, 2020
922020
Loop-extrusion and polymer phase-separation can co-exist at the single-molecule level to shape chromatin folding
M Conte, E Irani, AM Chiariello, A Abraham, S Bianco, A Esposito, ...
Nature Communications 13 (1), 4070, 2022
462022
Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin
L Fiorillo, F Musella, M Conte, R Kempfer, AM Chiariello, S Bianco, ...
Nature methods 18 (5), 482-490, 2021
412021
A dynamic folded hairpin conformation is associated with α-globin activation in erythroid cells
AM Chiariello, S Bianco, AM Oudelaar, A Esposito, C Annunziatella, ...
Cell Reports 30 (7), 2125-2135. e5, 2020
372020
Computational approaches from polymer physics to investigate chromatin folding
S Bianco, AM Chiariello, M Conte, A Esposito, L Fiorillo, F Musella, ...
Current opinion in cell biology 64, 10-17, 2020
312020
Modeling single-molecule conformations of the HoxD region in mouse embryonic stem and cortical neuronal cells
S Bianco, C Annunziatella, G Andrey, AM Chiariello, A Esposito, L Fiorillo, ...
Cell reports 28 (6), 1574-1583. e4, 2019
212019
A modern challenge of polymer physics: novel ways to study, interpret, and reconstruct chromatin structure
L Fiorillo, S Bianco, A Esposito, M Conte, R Sciarretta, F Musella, ...
Wiley Interdisciplinary Reviews: Computational Molecular Science 10 (4), e1454, 2020
202020
Polymer physics reveals a combinatorial code linking 3D chromatin architecture to 1D chromatin states
A Esposito, S Bianco, AM Chiariello, A Abraham, L Fiorillo, M Conte, ...
Cell Reports 38 (13), 2022
172022
Higher-order chromosome structures investigated by polymer physics in cellular morphogenesis and differentiation
A Esposito, AM Chiariello, M Conte, L Fiorillo, F Musella, R Sciarretta, ...
Journal of molecular biology 432 (3), 701-711, 2020
132020
Inference of chromosome 3D structures from GAM data by a physics computational approach
L Fiorillo, S Bianco, AM Chiariello, M Barbieri, A Esposito, ...
Methods 181, 70-79, 2020
122020
CTCF promotes long-range enhancer-promoter interactions and lineage-specific gene expression in mammalian cells
N Kubo, H Ishii, X Xiong, S Bianco, F Meitinger, R Hu, JD Hocker, ...
BioRxiv, 2020.03. 21.001693, 2020
122020
Divergent transcription of the Nkx2-5 locus generates two enhancer RNAs with opposing functions
I Salamon, S Serio, S Bianco, C Pagiatakis, S Crasto, AM Chiariello, ...
Iscience 23 (9), 2020
112020
Physical mechanisms of chromatin spatial organization
AM Chiariello, S Bianco, A Esposito, L Fiorillo, M Conte, E Irani, F Musella, ...
The FEBS Journal 289 (5), 1180-1190, 2022
102022
Polymer models are a versatile tool to study chromatin 3D organization
A Esposito, S Bianco, L Fiorillo, M Conte, A Abraham, F Musella, ...
Biochemical Society Transactions 49 (4), 1675-1684, 2021
92021
3DGenBench: a web-server to benchmark computational models for 3D Genomics
Nucleic Acids Research 50 (W1), W4-W12, 2022
82022
Comparison of the Hi-C, GAM and SPRITE methods by use of polymer models of chromatin
L Fiorillo, F Musella, R Kempfer, AM Chiariello, S Bianco, A Kukalev, ...
BioRxiv, 2020.04. 24.059915, 2020
82020
CTCF mediates dosage and sequence-context-dependent transcriptional insulation through formation of local chromatin domains
H Huang, Q Zhu, A Jussila, Y Han, B Bintu, C Kern, M Conte, Y Zhang, ...
bioRxiv, 2020.07. 07.192526, 2020
72020
The physics of DNA folding: polymer models and phase-separation
A Esposito, A Abraham, M Conte, F Vercellone, A Prisco, S Bianco, ...
Polymers 14 (9), 1918, 2022
62022
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