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Mattia Conte
Mattia Conte
Universitą di Napoli "Federico II"
Verified email at na.infn.it
Title
Cited by
Cited by
Year
Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation
N Kubo, H Ishii, X Xiong, S Bianco, F Meitinger, R Hu, JD Hocker, ...
Nature structural & molecular biology 28 (2), 152-161, 2021
752021
Polymer physics indicates chromatin folding variability across single-cells results from state degeneracy in phase separation
M Conte, L Fiorillo, S Bianco, AM Chiariello, A Esposito, M Nicodemi
Nature communications 11 (1), 1-13, 2020
442020
CTCF mediates dosage-and sequence-context-dependent transcriptional insulation by forming local chromatin domains
H Huang, Q Zhu, A Jussila, Y Han, B Bintu, C Kern, M Conte, Y Zhang, ...
Nature genetics 53 (7), 1064-1074, 2021
252021
A dynamic folded hairpin conformation is associated with α-globin activation in erythroid cells
AM Chiariello, S Bianco, AM Oudelaar, A Esposito, C Annunziatella, ...
Cell Reports 30 (7), 2125-2135. e5, 2020
242020
Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin
L Fiorillo, F Musella, M Conte, R Kempfer, AM Chiariello, S Bianco, ...
Nature methods 18 (5), 482-490, 2021
232021
Computational approaches from polymer physics to investigate chromatin folding
S Bianco, AM Chiariello, M Conte, A Esposito, L Fiorillo, F Musella, ...
Current Opinion in Cell Biology 64, 10-17, 2020
172020
Modeling single-molecule conformations of the HoxD region in mouse embryonic stem and cortical neuronal cells
S Bianco, C Annunziatella, G Andrey, AM Chiariello, A Esposito, L Fiorillo, ...
Cell Reports 28 (6), 1574-1583. e4, 2019
152019
A modern challenge of polymer physics: novel ways to study, interpret, and reconstruct chromatin structure
L Fiorillo, S Bianco, A Esposito, M Conte, R Sciarretta, F Musella, ...
Wiley Interdisciplinary Reviews: Computational Molecular Science 10 (4), e1454, 2020
102020
CTCF promotes long-range enhancer-promoter interactions and lineage-specific gene expression in mammalian cells
N Kubo, H Ishii, X Xiong, S Bianco, F Meitinger, R Hu, JD Hocker, ...
BioRxiv, 2020
102020
Inference of chromosome 3D structures from GAM data by a physics computational approach
L Fiorillo, S Bianco, AM Chiariello, M Barbieri, A Esposito, ...
Methods 181, 70-79, 2020
72020
CTCF mediates dosage and sequence-context-dependent transcriptional insulation through formation of local chromatin domains
H Huang, Q Zhu, A Jussila, Y Han, B Bintu, C Kern, M Conte, Y Zhang, ...
bioRxiv, 2020
72020
Physical mechanisms of chromatin spatial organization
AM Chiariello, S Bianco, A Esposito, L Fiorillo, M Conte, E Irani, F Musella, ...
The FEBS Journal 289 (5), 1180-1190, 2022
62022
Divergent transcription of the Nkx2-5 locus generates two enhancer RNAs with opposing functions
I Salamon, S Serio, S Bianco, C Pagiatakis, S Crasto, AM Chiariello, ...
IScience 23 (9), 101539, 2020
42020
Polymer physics and machine learning reveal a combinatorial code linking chromatin 3D architecture to 1D epigenetics
A Esposito, S Bianco, AM Chiariello, A Abraham, L Fiorillo, M Conte, ...
Biorxiv, 2021
32021
Higher-order chromosome structures investigated by polymer physics in cellular morphogenesis and differentiation
A Esposito, AM Chiariello, M Conte, L Fiorillo, F Musella, R Sciarretta, ...
Journal of molecular biology 432 (3), 701-711, 2020
32020
Polymer physics reveals a combinatorial code linking 3D chromatin architecture to 1D chromatin states
A Esposito, S Bianco, AM Chiariello, A Abraham, L Fiorillo, M Conte, ...
Cell Reports 38 (13), 110601, 2022
22022
Efficient computational implementation of polymer physics models to explore chromatin structure
M Conte, A Esposito, L Fiorillo, R Campanile, C Annunziatella, A Corrado, ...
International Journal of Parallel, Emergent and Distributed Systems 37 (1 …, 2022
22022
Dynamic and equilibrium properties of finite-size polymer models of chromosome folding
M Conte, L Fiorillo, C Annunziatella, A Esposito, F Musella, A Abraham, ...
Physical Review E 104 (5), 054402, 2021
12021
Polymer models are a versatile tool to study chromatin 3D organization
A Esposito, S Bianco, L Fiorillo, M Conte, A Abraham, F Musella, ...
Biochemical Society Transactions 49 (4), 1675-1684, 2021
12021
Loop-extrusion and polymer phase-separation can co-exist at the single-molecule level to shape chromatin folding
M Conte, E Irani, AM Chiariello, A Abraham, S Bianco, A Esposito, ...
bioRxiv, 2021
12021
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