| BLISS is a versatile and quantitative method for genome-wide profiling of DNA double-strand breaks WX Yan, R Mirzazadeh, S Garnerone, D Scott, MW Schneider, T Kallas, ... Nature communications 8 (1), 15058, 2017 | 340 | 2017 |
| Genome-wide spatial expression profiling in formalin-fixed tissues EG Villacampa, L Larsson, R Mirzazadeh, L Kvastad, A Andersson, ... Cell Genomics 1 (3), 2021 | 111 | 2021 |
| Spatially resolved clonal copy number alterations in benign and malignant tissue A Erickson, M He, E Berglund, M Marklund, R Mirzazadeh, N Schultz, ... Nature 608 (7922), 360-367, 2022 | 101 | 2022 |
| Super-resolved spatial transcriptomics by deep data fusion L Bergenstråhle, B He, J Bergenstråhle, X Abalo, R Mirzazadeh, K Thrane, ... Nature biotechnology 40 (4), 476-479, 2022 | 78 | 2022 |
| iFISH is a publically available resource enabling versatile DNA FISH to study genome architecture E Gelali, G Girelli, M Matsumoto, E Wernersson, J Custodio, A Mota, ... Nature communications 10 (1), 1636, 2019 | 60 | 2019 |
| Genome-wide spatial expression profiling in formalin-fixed tissues. L Larsson, R Mirzazadeh, L Kvastad, A Andersson, A Mollbrink, ... Cell Genomics 1 (3), 100065-100065, 2021 | 37 | 2021 |
| A recurrent chromosomal inversion suffices for driving escape from oncogene-induced senescence via subTAD reorganization CP Zampetidis, P Galanos, A Angelopoulou, Y Zhu, A Polyzou, ... Molecular Cell 81 (23), 4907-4923. e8, 2021 | 35 | 2021 |
| RollFISH achieves robust quantification of single-molecule RNA biomarkers in paraffin-embedded tumor tissue samples C Wu, M Simonetti, C Rossell, M Mignardi, R Mirzazadeh, L Annaratone, ... Communications biology 1 (1), 209, 2018 | 34 | 2018 |
| Spatial sexual dimorphism of X and Y homolog gene expression in the human central nervous system during early male development MM Johansson, E Lundin, X Qian, M Mirzazadeh, J Halvardson, E Darj, ... Biology of sex Differences 7, 1-17, 2016 | 29 | 2016 |
| A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung A Sountoulidis, S Marco Salas, E Braun, C Avenel, J Bergenstråhle, ... Nature Cell Biology 25 (2), 351-365, 2023 | 21 | 2023 |
| CUTseq is a versatile method for preparing multiplexed DNA sequencing libraries from low-input samples X Zhang, S Garnerone, M Simonetti, L Harbers, M Nicoś, R Mirzazadeh, ... Nature Communications 10 (1), 4732, 2019 | 17 | 2019 |
| Modeling double strand break susceptibility to interrogate structural variation in cancer TJ Ballinger, BAM Bouwman, R Mirzazadeh, S Garnerone, N Crosetto, ... Genome biology 20, 1-15, 2019 | 16 | 2019 |
| Genome-wide profiling of DNA double-strand breaks by the BLESS and BLISS methods R Mirzazadeh, T Kallas, M Bienko, N Crosetto Genome Instability: Methods and Protocols, 167-194, 2018 | 16 | 2018 |
| BLISS is a versatile and quantitative method for genome-wide profiling of DNA double-strand breaks. Nat Commun 8: 15058 WX Yan, R Mirzazadeh, S Garnerone, D Scott, MW Schneider, T Kallas, ... Molecular Therapy: Nucleic Acids, 2017 | 16 | 2017 |
| Spatial multimodal analysis of transcriptomes and metabolomes in tissues M Vicari, R Mirzazadeh, A Nilsson, R Shariatgorji, P Bjärterot, L Larsson, ... Nature Biotechnology, 1-5, 2023 | 14 | 2023 |
| Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples R Mirzazadeh, Z Andrusivova, L Larsson, PT Newton, LA Galicia, ... Nature Communications 14 (1), 509, 2023 | 14 | 2023 |
| In situ quantification of individual mRNA transcripts in melanocytes discloses gene regulation of relevance to speciation CC Wu, A Klaesson, J Buskas, P Ranefall, R Mirzazadeh, O Söderberg, ... Journal of Experimental Biology 222 (5), jeb194431, 2019 | 11 | 2019 |
| The spatial landscape of clonal somatic mutations in benign and malignant tissue A Erickson, E Berglund, M He, M Marklund, R Mirzazadeh, N Schultz, ... bioRxiv, 2021.07. 12.452018, 2021 | 7 | 2021 |
| Breaks labeling in situ and sequencing (BLISS) WX Yan, R Mirzazadeh, S Garnerone, D Scott, MW Schneider, T Kallas, ... | 6 | 2019 |
| Single-Cell and Spatial Transcriptomic Analysis of Human Skin Delineates Intercellular Communication and Pathogenic Cells K Thrane, MCG Winge, H Wang, L Chen, MG Guo, A Andersson, ... Journal of Investigative Dermatology 143 (11), 2177-2192. e13, 2023 | 4 | 2023 |
