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Zhen-lu Li
Zhen-lu Li
School of Life Science, TianJin University
Verified email at tju.edu.cn - Homepage
Title
Cited by
Cited by
Year
Computational Modeling Reveals that Signaling Lipids Modulate the Orientation of K-Ras4A at the Membrane Reflecting Protein Topology
ZL Li, M Buck
Structure 25 (4), 679-689, 2017
772017
Translocation of polyarginines and conjugated nanoparticles across asymmetric membranes
Z Li, H Ding, Y Ma
Soft Matter 9 (4), 1281-1286, 2013
732013
A “Tug of War” Maintains a Dynamic Protein–Membrane Complex: Molecular Dynamics Simulations of C-Raf RBD-CRD Bound to K-Ras4B at an Anionic Membrane
ZL Li, P Prakash, M Buck
ACS Central Science 4 (2), 298–305, 2018
532018
K-Ras G-domain binding with signaling lipid Phosphatidyl inositol (4,5) phosphate (PIP2): Membrane association, protein orientation and function
S Cao, S Chung, SJ Kim, Z Li, D Manor, M Buck
Journal of Bilogical Chemistry 294, 7068-7078, 2019
512019
Neuropilin-1 assists SARS-CoV-2 infection by stimulating the separation of Spike protein S1 and S2
Z Li, B Matthias
Biophysical Journal 120 (14), 2828-2837, 2021
492021
Raf promotes dimerization of the Ras G-domain with increased allosteric connections
M Packer, JA Parker, JK Chung, Z Li, YK Lee, T Cookis, H Guterres, ...
Proceedings of the National Academy of Sciences 118 (10), e2015648118, 2021
492021
Interaction of peptides with cell membranes: insights from molecular modeling
Z Li, H Ding, Y Ma
Journal of Physics: Condensed Matter 28 (8), 083001, 2016
272016
Modified Potential Functions Result in Enhanced Predictions of a Protein Complex by All-Atom Molecular Dynamics Simulations, Confirming a Stepwise Association Process for …
Z Li, M Buck
Journal of Chemical Theory and Computation 15 (8), 4318-4331, 2019
242019
The RNA-Binding Site of Poliovirus 3C Protein Doubles as a Phosphoinositide-Binding Domain
D Shengjuler,Y Chan,S Sun,IM Moustafa, ZL Li,DW Gohara,M Buck,PS Cremer,DD ...
Structure 25 (12), 1875–1886, 2017
242017
K-Ras at Anionic Membranes: Orientation, Orientation…Orientation. Recent Simulations and Experiments
Z Li, S Cao, M Buck
Biophysical Journal 110 (5), 1033-1035, 2016
142016
Molecular dynamics simulations of membrane deformation induced by amphiphilic helices of Epsin, Sar1p, and Arf1
Z Li
Chinese Physics B 27 (3), 038703, 2018
132018
Computational Design of Myristoylated Cell Penetrating Peptides Targeting Oncogenic K-Ras.G12D at the Effector Binding Membrane Interface
Z Li, M Buck
Journal of Chemical Information and Modeling 60 (1), 306–315, 2020
112020
Trimeric Receptor Binding Domain of SARS-CoV-2 Acts as a Potent Inhibitor of ACE2 Receptor-Mediated Viral Entry
SC Basavarajappa, AR Liu, A Bruchez, Z Li, VG Suzart, Z Liu, Y Chen, ...
iScience, 104716, 2022
82022
Plexin-Bs enhance their GAP activity with a novel activation switch loop
Z Li, J Muller-Greven, SJ Kim, L Tamagnone, M Buck
Cellular and Molecular Life Sciences, https://doi.org/10.1007/s00018-020-03571, 2020
8*2020
Computational studies of the principle of dynamic-change-driven protein interactions
Z Li, M Carla, B Matthias
Structure 30 (6), 909-916, 2022
72022
Beyond History and "on a Roll": The List of the most Well-Studied Human Protein Structures and Overall Trends in the Protein Data Bank
Z Li, M Buck
Protein Science 30 (4), 745-760, 2021
42021
Microsecond MD Simulations of the Plexin-B1 RBD: N–H Probability Density as Descriptor of Structural Dynamics, Dimerization-Related Conformational Entropy, and Transient Dimer …
Y Pshetitsky, N Mendelman, Z Li, M Zerbetto, M Buck, E Meirovitch
The Journal of Physical Chemistry B 126 (34), 6396-6407, 2022
22022
Microsecond MD Simulations of the Plexin-B1 RBD: 2. N–H Probability Densities and Conformational Entropy in Ligand-Free, Rac1-Bound, and Dimer RBD
N Mendelman, Y Pshetitsky, Z Li, M Zerbetto, M Buck, E Meirovitch
The Journal of Physical Chemistry B 126 (34), 6408-6418, 2022
22022
Influence of different membrane environments on the behavior of cholesterol
Z Li, J Wang, H Ding, Y Ma
RSC Advances 4 (95), 53090-53096, 2014
22014
Keys to Amyloid City: Computation and NMR reveal potential TDP-43 ALS intermediates
WM Babinchak, Z Li, M Buck
Biophysical Journal 115 (9), 1625-1627, 2018
12018
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Articles 1–20