Tandy Warnow
Tandy Warnow
Grainger Distinguished Chair in Engineering, UIUC
Verified email at - Homepage
Cited by
Cited by
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
Phylotranscriptomic analysis of the origin and early diversification of land plants
NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ...
Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014
ASTRAL: genome-scale coalescent-based species tree estimation
S Mirarab, R Reaz, MS Bayzid, T Zimmermann, MS Swenson, T Warnow
Bioinformatics 30 (17), i541-i548, 2014
ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes
S Mirarab, T Warnow
Bioinformatics 31 (12), i44-i52, 2015
Chemical phylogenetics of histone deacetylases
JE Bradner, N West, ML Grachan, EF Greenberg, SJ Haggarty, T Warnow, ...
Nature chemical biology 6 (3), 238-243, 2010
One thousand plant transcriptomes and the phylogenomics of green plants
J Leebens-Mack, and others
Nature 547, 679-685, 2019
Data access for the 1,000 Plants (1KP) project
N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ...
Gigascience 3 (1), 2047-217X-3-17, 2014
D Ringe, T Warnow, A Taylor
Transactions of the philological society 100 (1), 59ą129, 2002
Rapid and accurate large-scale coestimation of sequence alignments and phylogenetic trees
K Liu, S Raghavan, S Nelesen, CR Linder, T Warnow
Science 324 (5934), 1561-1564, 2009
The CIPRES portals
MA Miller, MT Holder, R Vos, PE Midford, T Liebowitz, L Chan, P Hoover, ...
CIPRES, 2009
SATe-II: very fast and accurate simultaneous estimation of multiple sequence alignments and phylogenetic trees
K Liu, TJ Warnow, MT Holder, SM Nelesen, J Yu, AP Stamatakis, ...
Systematic biology 61 (1), 90, 2012
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
PASTA: ultra-large multiple sequence alignment for nucleotide and amino-acid sequences
S Mirarab, N Nguyen, S Guo, LS Wang, J Kim, T Warnow
Journal of Computational Biology 22 (5), 377-386, 2015
Two strikes against perfect phylogeny
H Bodlaender, M Fellows, T Warnow
International Colloquium on Automata, Languages and Programming, 273-283, 1992
Perfect phylogenetic networks: A new methodology for reconstructing the evolutionary history of natural languages
L Nakhleh, D Ringe, T Warnow
Language, 382-420, 2005
A few logs suffice to build (almost) all trees: Part II
PL Erdös, MA Steel, LA Székely, TJ Warnow
Theoretical Computer Science 221 (1-2), 77-118, 1999
A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity
NP Nguyen, T Warnow, M Pop, B White
NPJ biofilms and microbiomes 2 (1), 1-8, 2016
Evaluating summary methods for multilocus species tree estimation in the presence of incomplete lineage sorting
S Mirarab, MS Bayzid, T Warnow
Systematic Biology 65 (3), 366-380, 2016
Reconstructing reticulate evolution in species: theory and practice
L Nakhleh, T Warnow, CR Linder
Proceedings of the eighth annual international conference on Research in …, 2004
Statistical binning enables an accurate coalescent-based estimation of the avian tree
S Mirarab, MS Bayzid, B Boussau, T Warnow
Science 346 (6215), 1250463, 2014
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