Debora Marks

Cited by

	All	Since 2018
Citations	27504	11724
h-index	52	43
i10-index	79	71

2600

1300

650

1950

20042005200620072008200920102011201220132014201520162017201820192020202120222023157 421 557 702 728 883 1008 1094 1329 1583 1709 1621 1782 1919 2112 2146 2259 2439 2582 179

Public access

View all

71 articles

1 article

available

not available

Based on funding mandates

Co-authors

Chris SanderHarvard Medical School, Broad Institute, Dana-Farber Cancer Institute, Memorial Sloan KetteringVerified email at sanderlab.org
Thomas A. HopfScientific ConsultantVerified email at thomashopf.com
Anton EnrightGroup Leader, Department of Pathology, University of CambridgeVerified email at cam.ac.uk
John IngrahamGenerate Biomedicines, IncVerified email at csail.mit.edu
Anna G. GreenDepartment of Biomedical Informatics, Harvard Medical SchoolVerified email at hms.harvard.edu
Charlotta ScharfePrincipal Data Scientist, F. Hoffmann-La Roche, SwitzerlandVerified email at roche.com
Doron BetelAssistant Professor of Computational Biomedicine, Weill Cornell Medical CollegeVerified email at med.cornell.edu
Riccardo Zecchinaprofessor, theoretical physics, Bocconi UniversityVerified email at unibocconi.it
Christina LeslieMemorial Sloan-Kettering Cancer CenterVerified email at cbio.mskcc.org
James J. RussoResearch Scientist, Associate DirectorVerified email at columbia.edu
Andrea PagnaniProfessor at DISAT - Politecnico di Torino, and PI at the IIGMVerified email at polito.it
Martin WeigtSorbonne Université Paris (former Université Pierre & Marie Curie)Verified email at upmc.fr
Bryan J. LuntPhD Candidate, University of Illinois as Urbana-ChampaignVerified email at illinois.edu
Sébastien PfefferInstitut de Biologie Moléculaire et Cellulaire, CNRSVerified email at unistra.fr
Erik Larsson LekholmSahlgrenska Academy, University of GothenburgVerified email at gu.se
Burkhard RostProfessor of Computer Science & Computational Biology & Bioinformatics, TUM, MunichVerified email at tum.de
Martin L MillerSenior Director, AstraZenecaVerified email at astrazeneca.com
Anders Jacobsen SkanderupGenome Institute of SingaporeVerified email at gis.a-star.edu.sg
Aaron ArveyArvey ConsultingVerified email at ucsf.edu
Kenneth S. Kosik UC Santa BarbaraVerified email at lifesci.ucsb.edu

Debora Marks

Systems Biology, Harvard Medical School, Broad Institute of Harvard and MIT

Verified email at hms.harvard.edu - Homepage

machine learning genomics drug design statistical inference protein folding & design


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Human microRNA targets B John, AJ Enright, A Aravin, T Tuschl, C Sander, DS Marks PLoS biology 2 (11), e363, 2004	4256	2004
MicroRNA targets in Drosophila AJ Enright, B John, U Gaul, T Tuschl, C Sander, DS Marks Genome biology 5 (1), 1-1, 2003	3471	2003
The microRNA. org resource: targets and expression D Betel, M Wilson, A Gabow, DS Marks, C Sander Nucleic acids research 36 (suppl_1), D149-D153, 2008	2796	2008
Identification of virus-encoded microRNAs S Pfeffer, M Zavolan, FA Grässer, M Chien, JJ Russo, J Ju, B John, ... Science 304 (5671), 734-736, 2004	1981	2004
Direct-coupling analysis of residue coevolution captures native contacts across many protein families F Morcos, A Pagnani, B Lunt, A Bertolino, DS Marks, C Sander, ... Proceedings of the National Academy of Sciences 108 (49), E1293-E1301, 2011	1292	2011
The small RNA profile during Drosophila melanogaster development AA Aravin, M Lagos-Quintana, A Yalcin, M Zavolan, D Marks, B Snyder, ... Developmental cell 5 (2), 337-350, 2003	1224	2003
Protein 3D structure computed from evolutionary sequence variation DS Marks, LJ Colwell, R Sheridan, TA Hopf, A Pagnani, R Zecchina, ... PloS one 6 (12), e28766, 2011	1102	2011
miR-122, a mammalian liver-specific microRNA, is processed from hcr mRNA and maydownregulate the high affinity cationic amino acid transporter CAT-1 J Chang, E Nicolas, D Marks, C Sander, A Lerro, MA Buendia, C Xu, ... RNA biology 1 (2), 106-113, 2004	986	2004
Protein structure prediction from sequence variation DS Marks, TA Hopf, C Sander Nature biotechnology 30 (11), 1072-1080, 2012	630	2012
miRcode: a map of putative microRNA target sites in the long non-coding transcriptome A Jeggari, DS Marks, E Larsson Bioinformatics 28 (15), 2062-2063, 2012	593	2012
Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs AA Khan, D Betel, ML Miller, C Sander, CS Leslie, DS Marks Nature biotechnology 27 (6), 549-555, 2009	587	2009
Three-dimensional structures of membrane proteins from genomic sequencing TA Hopf, LJ Colwell, R Sheridan, B Rost, C Sander, DS Marks Cell 149 (7), 1607-1621, 2012	545	2012
MicroRNA profiling of the murine hematopoietic system S Monticelli, KM Ansel, C Xiao, ND Socci, AM Krichevsky, TH Thai, ... Genome biology 6, 1-15, 2005	537	2005
Sequence co-evolution gives 3D contacts and structures of protein complexes TA Hopf, CPI Schärfe, JP Rodrigues, AG Green, O Kohlbacher, C Sander, ... elife 3, e03430, 2014	466	2014
Mutation effects predicted from sequence co-variation TA Hopf, JB Ingraham, FJ Poelwijk, CPI Schärfe, M Springer, C Sander, ... Nature biotechnology 35 (2), 128-135, 2017	445	2017
The developmental miRNA profiles of zebrafish as determined by small RNA cloning PY Chen, H Manninga, K Slanchev, M Chien, JJ Russo, J Ju, R Sheridan, ... Genes & development 19 (11), 1288-1293, 2005	420	2005
Antisense-mediated depletion reveals essential and specific functions of microRNAs in Drosophila development D Leaman, PY Chen, J Fak, A Yalcin, M Pearce, U Unnerstall, DS Marks, ... Cell 121 (7), 1097-1108, 2005	397	2005
MicroRNA control of protein expression noise JM Schmiedel, SL Klemm, Y Zheng, A Sahay, N Blüthgen, DS Marks, ... Science 348 (6230), 128-132, 2015	370	2015
Target mRNA abundance dilutes microRNA and siRNA activity A Arvey, E Larsson, C Sander, CS Leslie, DS Marks Molecular systems biology 6 (1), 363, 2010	370	2010
Pathway and network analysis of cancer genomes Nature methods 12 (7), 615-621, 2015	336	2015

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors