Mihaela Zavolan

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Erik van NimwegenProfessor of computational systems biology, Biozentrum, University of BaselVerified email at unibas.ch
Jean HausserKarolinska Institutet & SciLifeLabVerified email at ki.se
Markus HafnerSenior Investigator, NIAMS, National Institutes of HealthVerified email at nih.gov
Sébastien PfefferInstitut de Biologie Moléculaire et Cellulaire, CNRSVerified email at unistra.fr
Andreas R. GruberPaperpile LLCVerified email at paperpile.com
Markus LandthalerMax-Delbrück-Center for Molecular Medicine Berlin, Biologie Humboldt-Universität zu BerlinVerified email at mdc-berlin.de
Lukas BurgerResearch Associate, Friedrich Miescher Institute for Biomedical ResearchVerified email at fmi.ch
Alexander KanitzBiozentrum, University of BaselVerified email at unibas.ch
Alexander SchmidtBiozentrum, University of BaselVerified email at unibas.ch
Nikolaus RajewskyProfessor, Systems Biology, Max Delbruck Center for Molecular Medicine, BerlinVerified email at mdc-berlin.de
Souvik GhoshSenior Scientist (Quality Control)Verified email at lonza.com
Afzal P SyedSingle-cell Open Lab, DKFZ, Heidelberg, GermanyVerified email at dkfz-heidelberg.de
Foivos GypasNovartis Biomedical ResearchVerified email at novartis.com
Joao C GuimaraesFaculty of Medicine, University of Lisbon, PortugalVerified email at medicina.ulisboa.pt
Piotr J BalwierzPostdoctoral Researcher, Imperial College LondonVerified email at imperial.ac.uk
Hadi Jorjanipostdoc researcher at BiozentrumVerified email at unibas.ch
Giuseppe MacinoProfessore di Biologia Cellulare, Sapienza universityVerified email at bce.uniroma1.it
David HumeMater Research Institute-University of QueenslandVerified email at uq.edu.au
Edward YangAssistant Professor of Radiology, Boston Children's HospitalVerified email at childrens.harvard.edu
Oliver MühlemannProfessor of BiochemistryVerified email at unibe.ch

Mihaela Zavolan

Professor of Computational Biology, Biozentrum, University of Basel

Verified email at unibas.ch - Homepage

Computational models Gene Regulation small RNAs Polyadenylation Translation


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A mammalian microRNA expression atlas based on small RNA library sequencing P Landgraf, M Rusu, R Sheridan, A Sewer, N Iovino, A Aravin, S Pfeffer, ... Cell 129 (7), 1401-1414, 2007	4551	2007
The transcriptional landscape of the mammalian genome P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, ... science 309 (5740), 1559-1563, 2005	4061	2005
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP M Hafner, M Landthaler, L Burger, M Khorshid, J Hausser, P Berninger, ... Cell 141 (1), 129-141, 2010	3336	2010
Identification of virus-encoded microRNAs S Pfeffer, M Zavolan, FA Grässer, M Chien, JJ Russo, J Ju, B John, ... Science 304 (5671), 734-736, 2004	2125	2004
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs RIKEN Genome Exploration Research Group Phase I Team: Carninci P. 2 Hayatsu ... Nature 420 (6915), 563-573, 2002	2107	2002
A novel class of small RNAs bind to MILI protein in mouse testes A Aravin, D Gaidatzis, S Pfeffer, M Lagos-Quintana, P Landgraf, N Iovino, ... Nature 442 (7099), 203-207, 2006	1773	2006
Identification of microRNAs of the herpesvirus family S Pfeffer, A Sewer, M Lagos-Quintana, R Sheridan, C Sander, FA Grässer, ... Nature methods 2 (4), 269-276, 2005	1506	2005
The small RNA profile during Drosophila melanogaster development AA Aravin, M Lagos-Quintana, A Yalcin, M Zavolan, D Marks, B Snyder, ... Developmental cell 5 (2), 337-350, 2003	1304	2003
MicroRNAs 103 and 107 regulate insulin sensitivity M Trajkovski, J Hausser, J Soutschek, B Bhat, A Akin, M Zavolan, ... Nature 474 (7353), 649-653, 2011	1157	2011
miR-375 maintains normal pancreatic α-and β-cell mass MN Poy, J Hausser, M Trajkovski, M Braun, S Collins, P Rorsman, ... Proceedings of the National Academy of Sciences 106 (14), 5813-5818, 2009	932	2009
Cell-type-specific signatures of microRNAs on target mRNA expression P Sood, A Krek, M Zavolan, G Macino, N Rajewsky Proceedings of the National Academy of Sciences 103 (8), 2746-2751, 2006	806	2006
Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes E Yang, E van Nimwegen, M Zavolan, N Rajewsky, M Schroeder, ... Genome research 13 (8), 1863-1872, 2003	762	2003
Identification and consequences of miRNA–target interactions—beyond repression of gene expression J Hausser, M Zavolan Nature Reviews Genetics 15 (9), 599-612, 2014	726	2014
Cellular cofactors affecting hepatitis C virus infection and replication G Randall, M Panis, JD Cooper, TL Tellinghuisen, KE Sukhodolets, ... Proceedings of the National Academy of Sciences 104 (31), 12884-12889, 2007	691	2007
Quantitative technologies establish a novel microRNA profile of chronic lymphocytic leukemia V Fulci, S Chiaretti, M Goldoni, G Azzalin, N Carucci, S Tavolaro, ... Blood, The Journal of the American Society of Hematology 109 (11), 4944-4951, 2007	637	2007
MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells L Sinkkonen, T Hugenschmidt, P Berninger, D Gaidatzis, F Mohn, ... Nature structural & molecular biology 15 (3), 259-267, 2008	607	2008
A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins S Kishore, L Jaskiewicz, L Burger, J Hausser, M Khorshid, M Zavolan Nature methods 8 (7), 559-564, 2011	552	2011
Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs M Landthaler, D Gaidatzis, A Rothballer, PY Chen, SJ Soll, L Dinic, T Ojo, ... Rna 14 (12), 2580-2596, 2008	467	2008
Inference of miRNA targets using evolutionary conservation and pathway analysis D Gaidatzis, E van Nimwegen, J Hausser, M Zavolan BMC bioinformatics 8, 1-22, 2007	461	2007
The developmental miRNA profiles of zebrafish as determined by small RNA cloning PY Chen, H Manninga, K Slanchev, M Chien, JJ Russo, J Ju, R Sheridan, ... Genes & development 19 (11), 1288-1293, 2005	438	2005

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