Chaok Seok
Chaok Seok
Verified email at snu.ac.kr - Homepage
Title
Cited by
Cited by
Year
Use of the weighted histogram analysis method for the analysis of simulated and parallel tempering simulations
JD Chodera, WC Swope, JW Pitera, C Seok, KA Dill
Journal of Chemical Theory and Computation 3 (1), 26-41, 2007
4292007
Using quaternions to calculate RMSD
EA Coutsias, C Seok, KA Dill
Journal of computational chemistry 25 (15), 1849-1857, 2004
3242004
A kinematic view of loop closure
EA Coutsias, C Seok, MP Jacobson, KA Dill
Journal of computational chemistry 25 (4), 510-528, 2004
2472004
GalaxyRefine: protein structure refinement driven by side-chain repacking
L Heo, H Park, C Seok
Nucleic acids research 41 (W1), W384-W388, 2013
2422013
GalaxyWEB server for protein structure prediction and refinement
J Ko, H Park, L Heo, C Seok
Nucleic acids research 40 (W1), W294-W297, 2012
2262012
Pulsating tubules from noncovalent macrocycles
Z Huang, SK Kang, M Banno, T Yamaguchi, D Lee, C Seok, E Yashima, ...
Science 337 (6101), 1521-1526, 2012
2172012
Community-wide assessment of protein-interface modeling suggests improvements to design methodology
SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ...
Journal of molecular biology 414 (2), 289-302, 2011
1332011
GalaxyPepDock: a protein–peptide docking tool based on interaction similarity and energy optimization
H Lee, L Heo, MS Lee, C Seok
Nucleic acids research 43 (W1), W431-W435, 2015
1132015
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment
MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ...
Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016
1072016
Protein loop modeling by using fragment assembly and analytical loop closure
J Lee, D Lee, H Park, EA Coutsias, C Seok
Proteins: Structure, Function, and Bioinformatics 78 (16), 3428-3436, 2010
1072010
Prediction of protein structure and interaction by GALAXY protein modeling programs
W HeeShin
Biodesign 2, 1-11, 2014
932014
Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions
R Moretti, SJ Fleishman, R Agius, M Torchala, PA Bates, PL Kastritis, ...
Proteins: Structure, Function, and Bioinformatics 81 (11), 1980-1987, 2013
922013
The FALC-Loop web server for protein loop modeling
J Ko, D Lee, H Park, EA Coutsias, J Lee, C Seok
Nucleic acids research 39 (suppl_2), W210-W214, 2011
732011
The flexibility in the proline ring couples to the protein backbone
BK Ho, EA Coutsias, C Seok, KA Dill
Protein Science 14 (4), 1011-1018, 2005
732005
Self‐Dissociating Tubules from Helical Stacking of Noncovalent Macrocycles
HJ Kim, SK Kang, YK Lee, C Seok, JK Lee, WC Zin, M Lee
Angewandte Chemie 122 (45), 8649-8653, 2010
712010
Resultants and loop closure
EA Coutsias, C Seok, MJ Wester, KA Dill
International Journal of Quantum Chemistry 106 (1), 176-189, 2006
592006
GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regions
J Ko, H Park, C Seok
BMC bioinformatics 13 (1), 198, 2012
572012
Refinement of unreliable local regions in template‐based protein models
H Park, C Seok
Proteins: Structure, Function, and Bioinformatics 80 (8), 1974-1986, 2012
532012
GalaxySite: ligand-binding-site prediction by using molecular docking
L Heo, WH Shin, MS Lee, C Seok
Nucleic acids research 42 (W1), W210-W214, 2014
522014
Insertion-Duplication Mutagenesis inStreptococcus pneumoniae: Targeting Fragment Length Is a Critical Parameter in Use as a Random Insertion Tool
MS Lee, C Seok, DA Morrison
Applied and environmental microbiology 64 (12), 4796-4802, 1998
511998
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Articles 1–20