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Danielle J. Ingle
Danielle J. Ingle
Verified email at unimelb.edu.au
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Cited by
Year
EspL is a bacterial cysteine protease effector that cleaves RHIM proteins to block necroptosis and inflammation
JS Pearson, C Giogha, S Mühlen, U Nachbur, CLL Pham, Y Zhang, ...
Nature microbiology 2 (4), 1-10, 2017
1592017
Are Escherichia coli Pathotypes Still Relevant in the Era of Whole-Genome Sequencing?
RM Robins-Browne, KE Holt, DJ Ingle, DM Hocking, J Yang, M Tauschek
Frontiers in Cellular and Infection Microbiology 6, 141, 2016
1552016
In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O: H serotype combinations within and between pathogenic lineages
DJ Ingle, M Valcanis, A Kuzevski, M Tauschek, M Inouye, T Stinear, ...
Microbial genomics 2 (7), 2016
1302016
Co-circulation of Multidrug-resistant Shigella Among Men Who Have Sex With Men in Australia
DJ Ingle, M Easton, M Valcanis, T Seemann, JC Kwong, N Stephens, ...
Clinical Infectious Diseases 69 (9), 1535-1544, 2019
832019
Evolution of atypical enteropathogenic E. coli by repeated acquisition of LEE pathogenicity island variants
DJ Ingle, M Tauschek, DJ Edwards, DM Hocking, DJ Pickard, ...
Nature microbiology 1 (2), 1-9, 2016
822016
Dynamics of antimicrobial resistance in intestinal Escherichia coli from children in community settings in South Asia and sub-Saharan Africa
DJ Ingle, MM Levine, KL Kotloff, KE Holt, RM Robins-Browne
Nature microbiology 3 (9), 1063-1073, 2018
762018
Bridging of Neisseria gonorrhoeae lineages across sexual networks in the HIV pre-exposure prophylaxis era
DA Williamson, EPF Chow, CL Gorrie, T Seemann, DJ Ingle, N Higgins, ...
Nature communications 10 (1), 3988, 2019
752019
Biofilm formation by and thermal niche and virulence characteristics of Escherichia spp
DJ Ingle, O Clermont, D Skurnik, E Denamur, ST Walk, DM Gordon
Applied and environmental microbiology 77 (8), 2695-2700, 2011
722011
Repeated local emergence of carbapenem-resistant Acinetobacter baumannii in a single hospital ward
MB Schultz, DP Thanh, NT Do Hoan, RR Wick, DJ Ingle, J Hawkey, ...
Microbial genomics 2 (3), 2016
562016
Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers
DJ Ingle, S Nair, H Hartman, PM Ashton, ZA Dyson, M Day, J Freedman, ...
PLOS Neglected Tropical Diseases 13 (9), 2019
522019
Key parameters for genomics-based real-time detection and tracking of multidrug-resistant bacteria: a systematic analysis
CL Gorrie, AG Da Silva, DJ Ingle, C Higgs, T Seemann, TP Stinear, ...
The Lancet Microbe 2 (11), e575-e583, 2021
30*2021
Prolonged Outbreak of Multidrug-Resistant Shigella sonnei Harboring blaCTX-M-27 in Victoria, Australia
DJ Ingle, P Andersson, M Valcanis, J Barnden, AG da Silva, KA Horan, ...
Antimicrobial Agents and Chemotherapy 64 (12), e01518-20, 2020
302020
Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei
J Hawkey, K Paranagama, KS Baker, RJ Bengtsson, FX Weill, ...
Nature communications 12 (1), 2684, 2021
272021
Extensively drug-resistant Shigellosis in Australia among men who have sex with men
D Williamson, D Ingle, B Howden
New England Journal of Medicine 381 (25), 2477-2479, 2019
272019
Genomic analysis of fluoroquinolone-and tetracycline-resistant Campylobacter jejuni sequence type 6964 in humans and poultry, New Zealand, 2014–2016
NP French, J Zhang, GP Carter, AC Midwinter, PJ Biggs, K Dyet, BJ Gilpin, ...
Emerging Infectious Diseases 25 (12), 2226, 2019
272019
Evolutionary dynamics of multidrug resistant Salmonella enterica serovar 4,[5],12:i:- in Australia
DJ Ingle, RL Ambrose, SL Baines, S Duchene, A Gonçalves da Silva, ...
Nature Communications 12 (1), 4786, 2021
212021
Development of phylodynamic methods for bacterial pathogens
DJ Ingle, BP Howden, S Duchene
Trends in Microbiology 29 (9), 788-797, 2021
152021
Risk factors for asymptomatic enteric pathogen detection among men who have sex with men
DA Williamson, EPF Chow, D Lee, K Maddaford, M Sait, M Easton, ...
Open Forum Infectious Diseases 6 (9), ofz326, 2019
132019
Emergence and divergence of major lineages of Shiga-toxin-producing Escherichia coli in Australia
DJ Ingle, AG da Silva, M Valcanis, SA Ballard, T Seemann, AV Jennison, ...
Microbial genomics 5 (5), 2019
122019
GeneMates: an R package for Detecting Horizontal Gene Co-transfer between Bacteria Using Gene-gene Associations Controlled for Population Structure
Y Wan, RR Wick, J Zobel, DJ Ingle, M Inouye, KE Holt
BMC Genomics 21, 2020
102020
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