Claire Duvallet
Claire Duvallet
Science for America
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Cited by
Cited by
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
Meta-analysis of gut microbiome studies identifies disease-specific and shared responses
C Duvallet, SM Gibbons, T Gurry, RA Irizarry, EJ Alm
Nature communications 8 (1), 1784, 2017
SARS-CoV-2 titers in wastewater are higher than expected from clinically confirmed cases
F Wu, J Zhang, A Xiao, X Gu, WL Lee, F Armas, K Kauffman, W Hanage, ...
Msystems 5 (4), 10.1128/msystems. 00614-20, 2020
SARS-CoV-2 RNA concentrations in wastewater foreshadow dynamics and clinical presentation of new COVID-19 cases
F Wu, A Xiao, J Zhang, K Moniz, N Endo, F Armas, R Bonneau, MA Brown, ...
Science of The Total Environment 805, 150121, 2022
A practical guide to methods controlling false discoveries in computational biology
K Korthauer, PK Kimes, C Duvallet, A Reyes, A Subramanian, M Teng, ...
Genome biology 20, 1-21, 2019
Europe PMC free article
X Li, H Qian, J Hang, X Chen, L Hong, P Liang, J Li, S Xiao, J Wei, ...
Google Scholar, 2020
Wastewater surveillance of SARS-CoV-2 across 40 US states from February to June 2020
F Wu, A Xiao, J Zhang, K Moniz, N Endo, F Armas, M Bushman, PR Chai, ...
Water research 202, 117400, 2021
Correcting for batch effects in case-control microbiome studies
SM Gibbons, C Duvallet, EJ Alm
PLoS computational biology 14 (4), e1006102, 2018
Making waves: Defining the lead time of wastewater-based epidemiology for COVID-19
SW Olesen, M Imakaev, C Duvallet
Water Research 202, 117433, 2021
Metrics to relate COVID-19 wastewater data to clinical testing dynamics
A Xiao, F Wu, M Bushman, J Zhang, M Imakaev, PR Chai, C Duvallet, ...
Water research 212, 118070, 2022
Quantitative SARS-CoV-2 alpha variant B. 1.1. 7 tracking in wastewater by allele-specific RT-qPCR
WL Lee, M Imakaev, F Armas, KA McElroy, X Gu, C Duvallet, F Chandra, ...
Environmental Science & Technology Letters 8 (8), 675-682, 2021
SARS-CoV-2 titers in wastewater are higher than expected from clinically confirmed cases. mSystems 5 (4)
F Wu, J Zhang, A Xiao, X Gu, WL Lee, F Armas, K Kauffman, W Hanage, ...
Standardizing data reporting in the research community to enhance the utility of open data for SARS-CoV-2 wastewater surveillance
JS McClary-Gutierrez, ZT Aanderud, M Al-Faliti, C Duvallet, R Gonzalez, ...
Environmental Science: Water Research & Technology 7 (9), 1545-1551, 2021
Nationwide trends in COVID-19 cases and SARS-CoV-2 RNA wastewater concentrations in the United States
C Duvallet, F Wu, KA McElroy, M Imakaev, N Endo, A Xiao, J Zhang, ...
ACS Es&t Water 2 (11), 1899-1909, 2022
Framework for rational donor selection in fecal microbiota transplant clinical trials
C Duvallet, C Zellmer, P Panchal, S Budree, M Osman, EJ Alm
PLoS One 14 (10), e0222881, 2019
Predictability and persistence of prebiotic dietary supplementation in a healthy human cohort
T Gurry, SM Gibbons, LTT Nguyen, SM Kearney, A Ananthakrishnan, ...
Scientific reports 8 (1), 12699, 2018
dbOTU3: A new implementation of distribution-based OTU calling
SW Olesen, C Duvallet, EJ Alm
PLoS One 12 (5), e0176335, 2017
Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification
JA Baaijens, A Zulli, IM Ott, ME Petrone, T Alpert, JR Fauver, CC Kalinich, ...
medRxiv, 2021
Wastewater network infrastructure in public health: applications and learnings from the COVID-19 pandemic
N Sharara, N Endo, C Duvallet, N Ghaeli, M Matus, J Heussner, ...
PLOS Global Public Health 1 (12), e0000061, 2021
Peer reviewed: Mapping community opioid exposure through wastewater-based epidemiology as a means to engage pharmacies in harm reduction efforts
C Duvallet, BD Hayes, TB Erickson, PR Chai, M Matus
Preventing Chronic Disease 17, 2020
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