Bart Mesuere
Bart Mesuere
Verified email at ugent.be - Homepage
Title
Cited by
Cited by
Year
Unipept: tryptic peptide-based biodiversity analysis of metaproteome samples
B Mesuere, B Devreese, G Debyser, M Aerts, P Vandamme, P Dawyndt
Journal of proteome research 11 (12), 5773-5780, 2012
952012
The Unipept Metaproteomics Analysis Pipeline
B Mesuere, G Debyser, M Aerts, B Devreese, P Vandamme, P Dawyndt
Proteomics 15 (8), 1437–1442, 2015
822015
Faecal proteomics: a tool to investigate dysbiosis and inflammation in patients with cystic fibrosis
G Debyser, B Mesuere, L Clement, J Van de Weygaert, P Van Hecke, ...
Journal of Cystic Fibrosis 15 (2), 242-250, 2016
402016
Unipept web services for metaproteomics analysis
B Mesuere, T Willems, F Van der Jeugt, B Devreese, P Vandamme, ...
Bioinformatics 32 (11), 1746-1748, 2016
322016
Application of MALDI-TOF mass spectrometry for the detection of enterotoxins produced by pathogenic strains of the Bacillus cereus group
V Tsilia, B Devreese, I de Baenst, B Mesuere, A Rajkovic, M Uyttendaele, ...
Analytical and Bioanalytical Chemistry, 1-12, 2012
312012
Unipept 4.0: functional analysis of metaproteome data
R Gurdeep Singh, A Tanca, A Palomba, F Van der Jeugt, P Verschaffelt, ...
Journal of proteome research 18 (2), 606-615, 2019
282019
High-throughput metaproteomics data analysis with Unipept: A tutorial
B Mesuere, F Van der Jeugt, T Willems, T Naessens, B Devreese, ...
Journal of proteomics 171, 11-22, 2018
272018
Disseminating metaproteomic informatics capabilities and knowledge using the Galaxy-P framework
C Blank, C Easterly, B Gruening, J Johnson, CA Kolmeder, P Kumar, ...
Proteomes 6 (1), 7, 2018
182018
The unique peptidome: Taxon-specific tryptic peptides as biomarkers for targeted metaproteomics
B Mesuere, F Van der Jeugt, B Devreese, P Vandamme, P Dawyndt
Proteomics 16 (17), 2303-2432, 2016
162016
metaQuantome: An integrated, quantitative metaproteomics approach reveals connections between taxonomy and protein function in complex microbiomes
CW Easterly, R Sajulga, S Mehta, J Johnson, P Kumar, S Hubler, ...
Molecular & Cellular Proteomics 18 (8 suppl 1), S82-S91, 2019
52019
Peat substrate amended with chitin modulates the N-cycle, siderophore and chitinase responses in the lettuce rhizobiome
C De Tender, B Mesuere, F Van der Jeugt, A Haegeman, T Ruttink, ...
Scientific reports 9 (1), 1-11, 2019
32019
Unipept: computational exploration of metaproteome data
B Mesuere
Ghent University, 2016
32016
The Burkholderia cepacia small colony variants (SCV) are a more pathogenic bacterial form that may facilitate persistent respiratory infections in CF patients
A Pinto-de-Oliveira, CP Coutinho, CG Ramos, SA Sousa, C de Carvalho, ...
Abstracts of the 36th European Cystic Fibrosis Conference 12 (15), 2013
3*2013
A shotgun metaproteomics approach to study the faecal microbiome of patients with cystic fibrosis reveals a reduction of butyrate-producing bacteria
G Debyser, B Mesuere, L Clement, G Duytschaever, P Van Hecke, ...
Journal of Cystic Fibrosis 12, S80, 2013
22013
Survey of metaproteomics software tools for functional microbiome analysis
R Sajulga, C Easterly, M Riffle, B Mesuere, T Muth, S Mehta, P Kumar, ...
bioRxiv, 2020
12020
Unipept CLI 2.0: adding support for visualisations and functional annotations
P Verschaffelt, P Van Thienen, T Van Den Bossche, F Van der Jeugt, ...
Bioinformatics, 2020
2020
Connecting MetaProteomeAnalyzer and PeptideShaker to Unipept for seamless end-to-end metaproteomics data analysis
T Van Den Bossche, P Verschaffelt, K Schallert, H Barsnes, P Dawyndt, ...
Journal of Proteome Research, 2020
2020
A Method for Comprehensive Proteomic Analysis of Human Faecal Samples to Investigate Gut Dysbiosis in Patients with Cystic Fibrosis
G Debyser, M Aerts, P Van Hecke, B Mesuere, G Duytschaever, ...
Emerging Sample Treatments in Proteomics, 137-160, 2019
2019
Quantifying functional microbiomes: an integrated, quantitative metaproteomics approach
C Easterly, P Jagtap, N Szeinbaum, B Gruening, L Parsons, S Hubler, ...
F1000Research 7, 2018
2018
Acknowledgement to Reviewers of Proteomes in 2017
B Achour, J An, K An, A Andrieux, D Benndorf, A Brakhage, ...
2018
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Articles 1–20