Anna Kreshuk

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Coauteurs

Fred A. HamprechtProfessor, Heidelberg UniversityAdresse e-mail validée de iwr.uni-heidelberg.de
Constantin PapeJuniorprofessor, University GoettingenAdresse e-mail validée de embl.de
Adrian WolnyMachine Learning Research Scientist, Bayer AGAdresse e-mail validée de bayer.com
Ullrich KötheAdjunct Professor of Computer Science, University of HeidelbergAdresse e-mail validée de iwr.uni-heidelberg.de
Thorsten BeierQuantStackAdresse e-mail validée de quantstack.net
Christoph-Nikolas StraehleResearch Scientist, Bosch Center for Artificial IntelligenceAdresse e-mail validée de de.bosch.com
Dominik KutraKreshuk Group, Embl HeidelbergAdresse e-mail validée de embl.de
Stuart BergJanelia Research CampusAdresse e-mail validée de janelia.hhmi.org
Graham KnottSenior Scientist, EPFLAdresse e-mail validée de epfl.ch
Alberto BailoniPhD-Candidate, University of HeidelbergAdresse e-mail validée de iwr.uni-heidelberg.de
Martin SchieggResearch Scientist, Bosch Center for AIAdresse e-mail validée de bosch.com
Yannick SchwabEMBLAdresse e-mail validée de embl.de
Lorenzo CerroneZurich UniversityAdresse e-mail validée de uzh.ch
Steffen WolfMRC Laboratory of Molecular Biology, CambridgeAdresse e-mail validée de mrc-lmb.cam.ac.uk
Valentyna ZinchenkoEMBL HeidelbergAdresse e-mail validée de embl.de
Kay SchneitzTechnical University of MunichAdresse e-mail validée de tum.de
Athul VijayanPostdoc, Max Planck Institute for Plant Breeding Research, Koln, GermanyAdresse e-mail validée de mpipz.mpg.de
Alexis MaizelUniversity of HeidelbergAdresse e-mail validée de cos.uni-heidelberg.de
Kimberly MeechanResearch Software Engineer, UCL ARCAdresse e-mail validée de ucl.ac.uk
Robert PrevedelEuropean Molecular Biology Laboratory, Heidelberg, GermanyAdresse e-mail validée de embl.de

Suivre

Anna Kreshuk

Group Leader, EMBL Heidelberg

Adresse e-mail validée de embl.de

Machine Learning Computer Vision Biomedical Image Analysis


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Ilastik: interactive machine learning for (bio) image analysis S Berg, D Kutra, T Kroeger, CN Straehle, BX Kausler, C Haubold, ... Nature Methods 16 (12), 1226-1232, 2019	2163	2019
ROOT—A C++ framework for petabyte data storage, statistical analysis and visualization I Antcheva, M Ballintijn, B Bellenot, M Biskup, R Brun, N Buncic, P Canal, ... Computer Physics Communications 180 (12), 2499-2512, 2009	1004	2009
Accurate and versatile 3D segmentation of plant tissues at cellular resolution A Wolny, L Cerrone, A Vijayan, R Tofanelli, AV Barro, M Louveaux, ... Elife 9, e57613, 2020	246	2020
Common limitations of image processing metrics: A picture story A Reinke, MD Tizabi, CH Sudre, M Eisenmann, T Rädsch, M Baumgartner, ... arXiv preprint arXiv:2104.05642, 2021	218	2021
Deep learning enables fast and dense single-molecule localization with high accuracy A Speiser, LR Müller, P Hoess, U Matti, CJ Obara, WR Legant, A Kreshuk, ... Nature methods 18 (9), 1082-1090, 2021	216	2021
Metrics reloaded: recommendations for image analysis validation L Maier-Hein, A Reinke, P Godau, MD Tizabi, F Buettner, E Christodoulou, ... Nature methods 21 (2), 195-212, 2024	208	2024
ROOT—A C++ framework for petabyte data storage, statistical analysis and visualization I Antcheva, M Ballintijn, B Bellenot, M Biskup, R Brun, N Buncic, P Canal, ... Computer Physics Communications 182 (6), 1384-1385, 2011	203	2011
Profiling cellular diversity in sponges informs animal cell type and nervous system evolution JM Musser, KJ Schippers, M Nickel, G Mizzon, AB Kohn, C Pape, ... Science 374 (6568), 717-723, 2021	201	2021
Multicut brings automated neurite segmentation closer to human performance T Beier, C Pape, N Rahaman, T Prange, S Berg, DD Bock, A Cardona, ... Nature Methods 14 (2), 2017	180	2017
Automated detection and segmentation of synaptic contacts in nearly isotropic serial electron microscopy images A Kreshuk, CN Straehle, C Sommer, U Koethe, M Cantoni, G Knott, ... PloS one 6 (10), e24899, 2011	167	2011
Volume electron microscopy CJ Peddie, C Genoud, A Kreshuk, K Meechan, KD Micheva, K Narayan, ... Nature Reviews Methods Primers 2 (1), 51, 2022	159	2022
Metrics reloaded: Pitfalls and recommendations for image analysis validation L Maier-Hein, A Reinke, E Christodoulou, B Glocker, P Godau, F Isensee, ... arXiv preprint arXiv:2206.01653, 2022	130	2022
Three‐dimensional immersive virtual reality for studying cellular compartments in 3D models from EM preparations of neural tissues C Calì, J Baghabra, DJ Boges, GR Holst, A Kreshuk, FA Hamprecht, ... Journal of Comparative Neurology 524 (1), 23-38, 2016	117	2016
Deep learning-enhanced light-field imaging with continuous validation N Wagner, F Beuttenmueller, N Norlin, J Gierten, JC Boffi, J Wittbrodt, ... Nature Methods 18 (5), 557-563, 2021	109	2021
Whole-body integration of gene expression and single-cell morphology HM Vergara, C Pape, KI Meechan, V Zinchenko, C Genoud, AA Wanner, ... Cell 184 (18), 4819-4837. e22, 2021	98	2021
Understanding metric-related pitfalls in image analysis validation A Reinke, MD Tizabi, M Baumgartner, M Eisenmann, D Heckmann-Nötzel, ... arXiv preprint arXiv:2302.01790, 2023	97	2023
Convolutional networks for supervised mining of molecular patterns within cellular context I de Teresa-Trueba, SK Goetz, A Mattausch, F Stojanovska, CE Zimmerli, ... Nature Methods 20 (2), 284-294, 2023	96	2023
The Mutex Watershed: Efficient, Parameter-Free Image Partitioning S Wolf, C Pape, A Bailoni, N Rahaman, A Kreshuk, U Köthe, ... Proceedings of the European Conference on Computer Vision (ECCV), 546-562, 2018	95	2018
Correlative in vivo 2 photon and focused ion beam scanning electron microscopy of cortical neurons B Maco, A Holtmaat, M Cantoni, A Kreshuk, CN Straehle, FA Hamprecht, ... PloS one 8 (2), e57405, 2013	92	2013
QUINT: workflow for quantification and spatial analysis of features in histological images from rodent brain SC Yates, NE Groeneboom, C Coello, SF Lichtenthaler, PH Kuhn, ... Frontiers in Neuroinformatics 13, 75, 2019	87	2019

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