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Kristoffer Vitting-Seerup
Kristoffer Vitting-Seerup
Verified email at dtu.dk
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Cited by
Year
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
5952015
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature biotechnology 35 (9), 872-878, 2017
5422017
The RNA m6A reader YTHDF2 maintains oncogene expression and is a targetable dependency in glioblastoma stem cells
D Dixit, BC Prager, RC Gimple, HX Poh, Y Wang, Q Wu, Z Qiu, RL Kidwell, ...
Cancer discovery 11 (2), 480-499, 2021
2382021
Identification of a nuclear exosome decay pathway for processed transcripts
N Meola, M Domanski, E Karadoulama, Y Chen, C Gentil, D Pultz, ...
Molecular cell 64 (3), 520-533, 2016
2282016
The landscape of isoform switches in human cancers
K Vitting-Seerup, A Sandelin
Molecular Cancer Research 15 (9), 1206-1220, 2017
2022017
IsoformSwitchAnalyzeR: analysis of changes in genome-wide patterns of alternative splicing and its functional consequences
K Vitting-Seerup, A Sandelin
Bioinformatics 35 (21), 4469-4471, 2019
1772019
Loss-of-function variants in ADCY3 increase risk of obesity and type 2 diabetes
N Grarup, I Moltke, MK Andersen, M Dalby, K Vitting-Seerup, T Kern, ...
Nature genetics 50 (2), 172-174, 2018
1572018
spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data
K Vitting-Seerup, BT Porse, A Sandelin, J Waage
BMC bioinformatics 15, 1-7, 2014
1342014
Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies
M Boyd, M Thodberg, M Vitezic, J Bornholdt, K Vitting-Seerup, Y Chen, ...
Nature communications 9 (1), 1661, 2018
872018
UPF2-dependent nonsense-mediated mRNA decay pathway is essential for spermatogenesis by selectively eliminating longer 3'UTR transcripts
J Bao, K Vitting-Seerup, J Waage, C Tang, Y Ge, BT Porse, W Yan
PLoS genetics 12 (5), e1005863, 2016
862016
Targeting glioma stem‐like cell survival and chemoresistance through inhibition of lysine‐specific histone demethylase KDM 2B
M Staberg, RD Rasmussen, SR Michaelsen, H Pedersen, KE Jensen, ...
Molecular oncology 12 (3), 406-420, 2018
622018
UBL5 is essential for pre‐mRNA splicing and sister chromatid cohesion in human cells
Y Oka, H Varmark, K Vitting‐Seerup, P Beli, J Waage, A Hakobyan, ...
EMBO reports 15 (9), 956-964, 2014
622014
CAGEfightR: analysis of 5′-end data using R/Bioconductor
M Thodberg, A Thieffry, K Vitting-Seerup, R Andersson, A Sandelin
BMC bioinformatics 20, 1-13, 2019
482019
Astrogliogenesis in human fetal brain: complex spatiotemporal immunoreactivity patterns of GFAP, S100, AQP 4 and YKL‐40
CB Holst, CB Brøchner, K Vitting‐Seerup, K Møllgård
Journal of Anatomy 235 (3), 590-615, 2019
462019
Amplification of pico-scale DNA mediated by bacterial carrier DNA for small-cell-number transcription factor ChIP-seq
JS Jakobsen, FO Bagger, MS Hasemann, MB Schuster, AK Frank, ...
BMC genomics 16, 1-12, 2015
372015
A functional link between nuclear RNA decay and transcriptional control mediated by the polycomb repressive complex 2
W Garland, I Comet, M Wu, A Radzisheuskaya, L Rib, K Vitting-Seerup, ...
Cell reports 29 (7), 1800-1811. e6, 2019
362019
Mutant CEBPA directly drives the expression of the targetable tumor-promoting factor CD73 in AML
JS Jakobsen, LG Laursen, MB Schuster, S Pundhir, E Schoof, Y Ge, ...
Science advances 5 (7), eaaw4304, 2019
332019
Identification of Gene Transcription Start Sites and Enhancers Responding to Pulmonary Carbon Nanotube Exposure in Vivo
J Bornholdt, AT Saber, B Lilje, M Boyd, M Jørgensen, Y Chen, M Vitezic, ...
ACS nano 11 (4), 3597-3613, 2017
272017
On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase
H Ienasescu, K Li, R Andersson, M Vitezic, S Rennie, Y Chen, ...
Database 2016, baw144, 2016
252016
Replication protein A (RPA) mediates radio-resistance of glioblastoma cancer stem-like cells
H Pedersen, E Anne Adanma Obara, KJ Elbæk, K Vitting-Serup, ...
International Journal of Molecular Sciences 21 (5), 1588, 2020
242020
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