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Julien Duc
Julien Duc
Senior bioinformatician, EPFL
Verified email at epfl.ch
Title
Cited by
Cited by
Year
DUX-family transcription factors regulate zygotic genome activation in placental mammals
A De Iaco, E Planet, A Coluccio, S Verp, J Duc, D Trono
Nature genetics 49 (6), 941-945, 2017
5092017
Molecular criteria for defining the naive human pluripotent state
TW Theunissen, M Friedli, Y He, E Planet, RC O’Neil, S Markoulaki, ...
Cell stem cell 19 (4), 502-515, 2016
4952016
Evolutionally dynamic L1 regulation in embryonic stem cells
N Castro-Diaz, G Ecco, A Coluccio, A Kapopoulou, B Yazdanpanah, ...
Genes & development 28 (13), 1397-1409, 2014
2302014
Transposable elements and their KRAB-ZFP controllers regulate gene expression in adult tissues
G Ecco, M Cassano, A Kauzlaric, J Duc, A Coluccio, S Offner, M Imbeault, ...
Developmental cell 36 (6), 611-623, 2016
2212016
Hominoid-specific transposable elements and KZFPs facilitate human embryonic genome activation and control transcription in naive human ESCs
J Pontis, E Planet, S Offner, P Turelli, J Duc, A Coudray, TW Theunissen, ...
Cell stem cell 24 (5), 724-735. e5, 2019
2172019
Interplay of TRIM28 and DNA methylation in controlling human endogenous retroelements
P Turelli, N Castro-Diaz, F Marzetta, A Kapopoulou, C Raclot, J Duc, ...
Genome research 24 (8), 1260-1270, 2014
1842014
DPPA2 and DPPA4 are necessary to establish a 2C‐like state in mouse embryonic stem cells
A De Iaco, A Coudray, J Duc, D Trono
EMBO reports 20 (5), e47382, 2019
1102019
The interactome of KRAB zinc finger proteins reveals the evolutionary history of their functional diversification
PY Helleboid, M Heusel, J Duc, C Piot, CW Thorball, A Coluccio, J Pontis, ...
The EMBO journal 38 (18), e101220, 2019
722019
Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons
P Turelli, C Playfoot, D Grun, C Raclot, J Pontis, A Coudray, C Thorball, ...
Science advances 6 (35), eaba3200, 2020
502020
Individual retrotransposon integrants are differentially controlled by KZFP/KAP1-dependent histone methylation, DNA methylation and TET-mediated hydroxymethylation in naïve …
A Coluccio, G Ecco, J Duc, S Offner, P Turelli, D Trono
Epigenetics & chromatin 11, 1-18, 2018
482018
The mouse genome displays highly dynamic populations of KRAB-zinc finger protein genes and related genetic units
A Kauzlaric, G Ecco, M Cassano, J Duc, M Imbeault, D Trono
PloS one 12 (3), e0173746, 2017
442017
KAP1 facilitates reinstatement of heterochromatin after DNA replication
SM Jang, A Kauzlaric, JP Quivy, J Pontis, B Rauwel, A Coluccio, S Offner, ...
Nucleic acids research 46 (17), 8788-8802, 2018
392018
Seroprevalence of anti-SARS-CoV-2 antibodies and cross-variant neutralization capacity after the Omicron BA. 2 wave in Geneva, Switzerland: a population-based study
ME Zaballa, J Perez-Saez, C de Mestral, N Pullen, J Lamour, P Turelli, ...
The Lancet Regional Health–Europe 24, 2023
322023
ZFP30 promotes adipogenesis through the KAP1-mediated activation of a retrotransposon-derived Pparg2 enhancer
W Chen, PC Schwalie, EV Pankevich, C Gubelmann, SK Raghav, ...
Nature communications 10 (1), 1809, 2019
322019
Primate-specific transposable elements shape transcriptional networks during human development
J Pontis, C Pulver, CJ Playfoot, E Planet, D Grun, S Offner, J Duc, ...
Nature Communications 13 (1), 7178, 2022
302022
Transposable elements and their KZFP controllers are drivers of transcriptional innovation in the developing human brain
CJ Playfoot, J Duc, S Sheppard, S Dind, A Coudray, E Planet, D Trono
Genome research 31 (9), 1531-1545, 2021
272021
KRAB zinc finger protein ZNF676 controls the transcriptional influence of LTR12-related endogenous retrovirus sequences
A Iouranova, D Grun, T Rossy, J Duc, A Coudray, M Imbeault, ...
Mobile Dna 13 (1), 4, 2022
202022
Genetic features and genomic targets of human KRAB-zinc finger proteins
J de Tribolet-Hardy, CW Thorball, R Forey, E Planet, J Duc, A Coudray, ...
Genome Research 33 (8), 1409-1423, 2023
112023
Transposon-activated POU5F1B promotes colorectal cancer growth and metastasis
L Simó-Riudalbas, S Offner, E Planet, J Duc, L Abrami, S Dind, A Coudray, ...
Nature Communications 13 (1), 4913, 2022
92022
Primate-specific cis- and trans-regulators shape transcriptional networks during human development
J Pontis, C Pulver, E Planet, D Grun, S Offner, J Duc, A Manfrin, M Lutolf, ...
bioRxiv, 2021.08. 18.456764, 2021
42021
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