Daniel Murad Ibrahim
Cited by
Cited by
The single-cell transcriptional landscape of mammalian organogenesis
J Cao, M Spielmann, X Qiu, X Huang, DM Ibrahim, AJ Hill, F Zhang, ...
Nature 566 (7745), 496-502, 2019
Formation of new chromatin domains determines pathogenicity of genomic duplications
M Franke, DM Ibrahim, G Andrey, W Schwarzer, V Heinrich, R Schöpflin, ...
Nature 538 (7624), 265-269, 2016
Functional dissection of the Sox9Kcnj2 locus identifies nonessential and instructive roles of TAD architecture
A Despang, R Schöpflin, M Franke, S Ali, I Jerković, C Paliou, WL Chan, ...
Nature genetics 51 (8), 1263-1271, 2019
Deletions, inversions, duplications: engineering of structural variants using CRISPR/Cas in mice
K Kraft, S Geuer, AJ Will, WL Chan, C Paliou, M Borschiwer, I Harabula, ...
Cell reports 10 (5), 833-839, 2015
Homeotic arm-to-leg transformation associated with genomic rearrangements at the PITX1 locus
M Spielmann, F Brancati, PM Krawitz, PN Robinson, DM Ibrahim, ...
The American Journal of Human Genetics 91 (4), 629-635, 2012
Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding
G Andrey, R Schöpflin, I Jerković, V Heinrich, DM Ibrahim, C Paliou, ...
Genome research 27 (2), 223-233, 2017
Serial genomic inversions induce tissue-specific architectural stripes, gene misexpression and congenital malformations
K Kraft, A Magg, V Heinrich, C Riemenschneider, R Schöpflin, ...
Nature cell biology 21 (3), 305-310, 2019
Unblending of transcriptional condensates in human repeat expansion disease
S Basu, SD Mackowiak, H Niskanen, D Knezevic, V Asimi, S Grosswendt, ...
Cell 181 (5), 1062-1079. e30, 2020
Odd skipped-related 1 identifies a population of embryonic fibro-adipogenic progenitors regulating myogenesis during limb development
P Vallecillo-García, M Orgeur, S vom Hofe-Schneider, J Stumm, V Kappert, ...
Nature communications 8 (1), 1218, 2017
Regulation of cell polarity in the cartilage growth plate and perichondrium of metacarpal elements by HOXD13 and WNT5A
P Kuss, K Kraft, J Stumm, D Ibrahim, P Vallecillo-Garcia, S Mundlos, ...
Developmental biology 385 (1), 83-93, 2014
The role of 3D chromatin domains in gene regulation: a multi-facetted view on genome organization
DM Ibrahim, S Mundlos
Current opinion in genetics & development 61, 1-8, 2020
Three-dimensional chromatin in disease: what holds us together and what drives us apart?
DM Ibrahim, S Mundlos
Current Opinion in Cell Biology 64, 1-9, 2020
Genome-wide binding of posterior HOXA/D transcription factors reveals subgrouping and association with CTCF
I Jerković, DM Ibrahim, G Andrey, S Haas, P Hansen, C Janetzki, ...
PLoS genetics 13 (1), e1006567, 2017
Saturation analysis of ChIP-seq data for reproducible identification of binding peaks
P Hansen, J Hecht, DM Ibrahim, A Krannich, M Truss, PN Robinson
Genome research 25 (9), 1391-1400, 2015
Distinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutations
DM Ibrahim, P Hansen, C Rödelsperger, AC Stiege, SC Doelken, D Horn, ...
Genome research 23 (12), 2091-2102, 2013
Mutation in LBX1/Lbx1 precludes transcription factor cooperativity and causes congenital hypoventilation in humans and mice
LR Hernandez-Miranda, DM Ibrahim, PL Ruffault, M Larrosa, K Balueva, ...
Proceedings of the National Academy of Sciences 115 (51), 13021-13026, 2018
Microarray Comparison of Anterior and Posterior Drosophila Wing Imaginal Disc Cells Identifies Novel Wing Genes
DM Ibrahim, B Biehs, TB Kornberg, A Klebes
G3: Genes, Genomes, Genetics 3 (8), 1353-1362, 2013
Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes
AR Ringel, Q Szabo, AM Chiariello, K Chudzik, R Schöpflin, P Rothe, ...
Cell 185 (20), 3689-3704. e21, 2022
A homozygous HOXD13 missense mutation causes a severe form of synpolydactyly with metacarpal to carpal transformation
DM Ibrahim, N Tayebi, A Knaus, AC Stiege, A Sahebzamani, J Hecht, ...
American journal of medical genetics Part A 170 (3), 615-621, 2016
Promoter repression and 3D-restructuring resolves divergent developmental gene expression in TADs
AR Ringel, Q Szabo, AM Chiariello, K Chudzik, R Schöpflin, P Rothe, ...
BioRxiv, 2021.10. 08.463672, 2021
The system can't perform the operation now. Try again later.
Articles 1–20