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Daniel J. Macqueen
Daniel J. Macqueen
Professor & Head of Genome Biology Division, The Roslin Institute, University of Edinburgh
Verified email at roslin.ed.ac.uk - Homepage
Title
Cited by
Cited by
Year
Growth and the regulation of myotomal muscle mass in teleost fish
IA Johnston, NI Bower, DJ Macqueen
Journal of Experimental Biology 214 (10), 1617-1628, 2011
4632011
A well-constrained estimate for the timing of the salmonid whole genome duplication reveals major decoupling from species diversification
DJ Macqueen, IA Johnston
Proceedings of the Royal Society B: Biological Sciences 281 (1778), 20132881, 2014
4402014
Harnessing genomics to fast-track genetic improvement in aquaculture
RD Houston, TP Bean, DJ Macqueen, MK Gundappa, YH Jin, TL Jenkins, ...
Nature Reviews Genetics 21 (7), 389-409, 2020
3582020
Embryonic temperature affects muscle fibre recruitment in adult zebrafish: genome-wide changes in gene and microRNA expression associated with the transition from hyperplastic …
IA Johnston, HT Lee, DJ Macqueen, K Paranthaman, C Kawashima, ...
Journal of Experimental Biology 212 (12), 1781-1793, 2009
1852009
Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification
FM Robertson, MK Gundappa, F Grammes, TR Hvidsten, AK Redmond, ...
Genome biology 18, 1-14, 2017
1652017
Evolution of the multifaceted eukaryotic akiringene family
DJ Macqueen, IA Johnston
BMC evolutionary biology 9, 1-20, 2009
1072009
Coupling of diversification and pH adaptation during the evolution of terrestrial Thaumarchaeota
C Gubry-Rangin, C Kratsch, TA Williams, AC McHardy, TM Embley, ...
Proceedings of the National Academy of Sciences 112 (30), 9370-9375, 2015
1062015
Temperature until the ‘eyed stage’of embryogenesis programmes the growth trajectory and muscle phenotype of adult Atlantic salmon
DJ Macqueen, DHF Robb, T Olsen, L Melstveit, CGM Paxton, IA Johnston
Biology Letters 4 (3), 294-298, 2008
1022008
Evolution of ancient functions in the vertebrate insulin-like growth factor system uncovered by study of duplicated salmonid fish genomes
DJ Macqueen, D Garcia de la Serrana, IA Johnston
Molecular Biology and Evolution 30 (5), 1060-1076, 2013
1012013
Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture
DJ Macqueen, CR Primmer, RD Houston, BF Nowak, L Bernatchez, ...
BMC genomics 18 (1), 484, 2017
972017
From FAANG to fork: application of highly annotated genomes to improve farmed animal production
EL Clark, AL Archibald, HD Daetwyler, MAM Groenen, PW Harrison, ...
Genome Biology 21, 1-9, 2020
872020
High-throughput proteomic profiling of the fish liver following bacterial infection
DR Causey, MAN Pohl, DA Stead, SAM Martin, CJ Secombes, ...
BMC genomics 19, 1-17, 2018
842018
Insulin-like growth factor-binding proteins of teleost fishes
D Garcia de la Serrana, DJ Macqueen
Frontiers in Endocrinology 9, 350039, 2018
822018
The structural variation landscape in 492 Atlantic salmon genomes
AC Bertolotti, RM Layer, MK Gundappa, MD Gallagher, E Pehlivanoglu, ...
Nature Communications 11 (1), 5176, 2020
802020
Atlantic salmon (Salmo salar L.) genetics in the 21st century: taking leaps forward in aquaculture and biological understanding
RD Houston, DJ Macqueen
Animal Genetics 50 (1), 3-14, 2019
782019
Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication
GB Gillard, L Grønvold, LL Røsæg, MM Holen, Ø Monsen, BF Koop, ...
Genome Biology 22, 1-18, 2021
64*2021
Discovery of all three types in cartilaginous fishes enables phylogenetic resolution of the origins and evolution of interferons
AK Redmond, J Zou, CJ Secombes, DJ Macqueen, H Dooley
Frontiers in immunology 10, 467824, 2019
622019
Disparate developmental patterns of immune responses to bacterial and viral infections in fish
R Castro, L Jouneau, L Tacchi, DJ Macqueen, A Alzaid, CJ Secombes, ...
Scientific Reports 5 (1), 15458, 2015
592015
Temperature influences the coordinated expression of myogenic regulatory factors during embryonic myogenesis in Atlantic salmon (Salmo salarL.)
DJ Macqueen, D Robb, IA Johnston
Journal of Experimental Biology 210 (16), 2781-2794, 2007
592007
The parallel evolution of dwarfism in Arctic charr is accompanied by adaptive divergence in mTOR‐pathway gene expression
DJ Macqueen, BK Kristjánsson, CGM Paxton, VLA Vieira, IA Johnston
Molecular ecology 20 (15), 3167-3184, 2011
552011
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Articles 1–20