Suivre
Lee Cooper
Lee Cooper
Department of Pathology, Northwestern University
Adresse e-mail validée de northwestern.edu - Page d'accueil
Titre
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Année
Comprehensive, integrative genomic analysis of diffuse lower-grade gliomas
Cancer Genome Atlas Research Network
New England Journal of Medicine 372 (26), 2481-2498, 2015
28242015
Molecular profiling reveals biologically discrete subsets and pathways of progression in diffuse glioma
M Ceccarelli, FP Barthel, TM Malta, TS Sabedot, SR Salama, BA Murray, ...
Cell 164 (3), 550-563, 2016
19402016
Predicting cancer outcomes from histology and genomics using convolutional networks
P Mobadersany, S Yousefi, M Amgad, DA Gutman, JS Barnholtz-Sloan, ...
Proceedings of the National Academy of Sciences 115 (13), E2970-E2979, 2018
8422018
Comprehensive and integrated genomic characterization of adult soft tissue sarcomas
AJ Lazar, MD McLellan, MH Bailey, CA Miller, EL Appelbaum, MG Cordes, ...
Cell 171 (4), 950-965, 2017
7542017
MR imaging predictors of molecular profile and survival: multi-institutional study of the TCGA glioblastoma data set
DA Gutman, LAD Cooper, SN Hwang, CA Holder, JJ Gao, TD Aurora, ...
Radiology 267 (2), 560-569, 2013
4442013
T2–FLAIR mismatch, an imaging biomarker for IDH and 1p/19q status in lower-grade gliomas: a TCGA/TCIA project
SH Patel, LM Poisson, DJ Brat, Y Zhou, L Cooper, M Snuderl, C Thomas, ...
Clinical cancer research 23 (20), 6078-6085, 2017
3162017
Deep learning enables robust assessment and selection of human blastocysts after in vitro fertilization
P Khosravi, E Kazemi, Q Zhan, JE Malmsten, M Toschi, P Zisimopoulos, ...
NPJ digital medicine 2 (1), 21, 2019
2792019
The tumor microenvironment strongly impacts master transcriptional regulators and gene expression class of glioblastoma
LAD Cooper, DA Gutman, C Chisolm, C Appin, J Kong, Y Rong, T Kurc, ...
The American journal of pathology 180 (5), 2108-2119, 2012
2382012
Predicting clinical outcomes from large scale cancer genomic profiles with deep survival models
S Yousefi, F Amrollahi, M Amgad, C Dong, JE Lewis, C Song, DA Gutman, ...
Scientific reports 7 (1), 11707, 2017
2152017
Tumor-infiltrating lymphocytes in glioblastoma are associated with specific genomic alterations and related to transcriptional class
WC Rutledge, J Kong, J Gao, DA Gutman, LAD Cooper, C Appin, Y Park, ...
Clinical Cancer Research 19 (18), 4951-4960, 2013
2032013
The OncoPPi network of cancer-focused protein–protein interactions to inform biological insights and therapeutic strategies
Z Li, AA Ivanov, R Su, V Gonzalez-Pecchi, Q Qi, S Liu, P Webber, ...
Nature communications 8 (1), 14356, 2017
1982017
Structured crowdsourcing enables convolutional segmentation of histology images
M Amgad, H Elfandy, H Hussein, LA Atteya, MAT Elsebaie, LS Abo Elnasr, ...
Bioinformatics 35 (18), 3461-3467, 2019
1802019
Monai: An open-source framework for deep learning in healthcare
MJ Cardoso, W Li, R Brown, N Ma, E Kerfoot, Y Wang, B Murrey, ...
arXiv preprint arXiv:2211.02701, 2022
1772022
Glioma progression is shaped by genetic evolution and microenvironment interactions
FS Varn, KC Johnson, J Martinek, JT Huse, MLP Nasrallah, P Wesseling, ...
Cell 185 (12), 2184-2199. e16, 2022
1722022
Cancer Digital Slide Archive: an informatics resource to support integrated in silico analysis of TCGA pathology data
DA Gutman, J Cobb, D Somanna, Y Park, F Wang, T Kurc, JH Saltz, ...
Journal of the American Medical Informatics Association 20 (6), 1091-1098, 2013
1702013
PanCancer insights from The Cancer Genome Atlas: the pathologist's perspective
LAD Cooper, EG Demicco, JH Saltz, RT Powell, A Rao, AJ Lazar
The Journal of pathology 244 (5), 512-524, 2018
1682018
The proneural molecular signature is enriched in oligodendrogliomas and predicts improved survival among diffuse gliomas
LAD Cooper, DA Gutman, Q Long, BA Johnson, SR Cholleti, T Kurc, ...
PloS one 5 (9), e12548, 2010
1632010
An expanded universe of cancer targets
WC Hahn, JS Bader, TP Braun, A Califano, PA Clemons, BJ Druker, ...
Cell 184 (5), 1142-1155, 2021
1532021
The digital slide archive: A software platform for management, integration, and analysis of histology for cancer research
DA Gutman, M Khalilia, S Lee, M Nalisnik, Z Mullen, J Beezley, ...
Cancer research 77 (21), e75-e78, 2017
1392017
Pitfalls in assessing stromal tumor infiltrating lymphocytes (sTILs) in breast cancer
Z Kos, E Roblin, RS Kim, S Michiels, BD Gallas, W Chen, KK van de Vijver, ...
NPJ breast cancer 6 (1), 17, 2020
1262020
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