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Daniel Day
Daniel Day
Postdoctoral Fellow, Whitehead Institute
Verified email at mit.edu
Title
Cited by
Cited by
Year
Coactivator condensation at super-enhancers links phase separation and gene control
BR Sabari, A Dall’Agnese, A Boija, IA Klein, EL Coffey, K Shrinivas, ...
Science 361 (6400), eaar3958, 2018
18482018
Activation of proto-oncogenes by disruption of chromosome neighborhoods
D Hnisz, AS Weintraub, DS Day, AL Valton, RO Bak, CH Li, J Goldmann, ...
Science 351 (6280), 1454-1458, 2016
10232016
YY1 is a structural regulator of enhancer-promoter loops
AS Weintraub, CH Li, AV Zamudio, AA Sigova, NM Hannett, DS Day, ...
Cell 171 (7), 1573-1588. e28, 2017
8432017
An assessment of histone-modification antibody quality
TA Egelhofer, A Minoda, S Klugman, K Lee, P Kolasinska-Zwierz, ...
Nature structural & molecular biology 18 (1), 91-93, 2011
4792011
Insulated neighborhoods: structural and functional units of mammalian gene control
D Hnisz, DS Day, RA Young
Cell 167 (5), 1188-1200, 2016
4272016
Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449-452, 2014
4092014
CDK12 loss in cancer cells affects DNA damage response genes through premature cleavage and polyadenylation
M Krajewska, R Dries, AV Grassetti, S Dust, Y Gao, H Huang, B Sharma, ...
Nature communications 10 (1), 1757, 2019
1892019
Transcriptional dysregulation of MYC reveals common enhancer-docking mechanism
J Schuijers, JC Manteiga, AS Weintraub, DS Day, AV Zamudio, D Hnisz, ...
Cell reports 23 (2), 349-360, 2018
1622018
Interrogating translational efficiency and lineage-specific transcriptomes using ribosome affinity purification
P Zhou, Y Zhang, Q Ma, F Gu, DS Day, A He, B Zhou, J Li, SM Stevens, ...
Proceedings of the National Academy of Sciences 110 (38), 15395-15400, 2013
1342013
Estimating enrichment of repetitive elements from high-throughput sequence data
DS Day, LJ Luquette, PJ Park, PV Kharchenko
Genome biology 11, 1-12, 2010
1182010
A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity
B Zhang, DS Day, JW Ho, L Song, J Cao, D Christodoulou, JG Seidman, ...
Genome research 23 (6), 917-927, 2013
1062013
BORIS promotes chromatin regulatory interactions in treatment-resistant cancer cells
DN Debruyne, R Dries, S Sengupta, D Seruggia, Y Gao, B Sharma, ...
Nature 572 (7771), 676-680, 2019
982019
Comprehensive analysis of promoter-proximal RNA polymerase II pausing across mammalian cell types
DS Day, B Zhang, SM Stevens, F Ferrari, EN Larschan, PJ Park, WT Pu
Genome biology 17, 1-17, 2016
982016
Cdk1 controls global epigenetic landscape in embryonic stem cells
W Michowski, JM Chick, C Chu, A Kolodziejczyk, Y Wang, JM Suski, ...
Molecular cell 78 (3), 459-476. e13, 2020
872020
VEGF amplifies transcription through ETS1 acetylation to enable angiogenesis
J Chen, Y Fu, DS Day, Y Sun, S Wang, X Liang, F Gu, F Zhang, ...
Nature communications 8 (1), 383, 2017
872017
Amniocytes can serve a dual function as a source of iPS cells and feeder layers
RM Anchan, P Quaas, B Gerami-Naini, H Bartake, A Griffin, Y Zhou, ...
Human molecular genetics 20 (5), 962-974, 2011
812011
A dynamic and integrated epigenetic program at distal regions orchestrates transcriptional responses to VEGFA
S Wang, J Chen, SP Garcia, X Liang, F Zhang, P Yan, H Yu, W Wei, Z Li, ...
Genome Research 29 (2), 193-207, 2019
142019
Coactivator condensation at super-enhancers links phase separation and gene control. Science
BR Sabari, A Dall’Agnese, A Boija, IA Klein, EL Coffey, K Shrinivas, ...
112018
BRD2 interconnects with BRD3 to facilitate Pol II transcription initiation and elongation to prime promoters for cell differentiation
C Wang, Q Xu, X Zhang, DS Day, BJ Abraham, K Lun, L Chen, J Huang, ...
Cellular and Molecular Life Sciences 79 (6), 338, 2022
102022
Targeting transcription in heart failure via CDK7/12/13 inhibition
A Hsu, Q Duan, DS Day, X Luo, S McMahon, Y Huang, ZB Feldman, ...
Nature communications 13 (1), 4345, 2022
32022
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