| Detecting differential and correlated protein expression in label-free shotgun proteomics B Zhang, NC VerBerkmoes, MA Langston, E Uberbacher, RL Hettich, ... Journal of proteome research 5 (11), 2909-2918, 2006 | 449 | 2006 |
| Gene network shaping of inherent noise spectra DW Austin, MS Allen, JM McCollum, RD Dar, JR Wilgus, GS Sayler, ... Nature 439 (7076), 608-611, 2006 | 351 | 2006 |
| Theory-guided data science: A new paradigm for scientific discovery from data A Karpatne, G Atluri, JH Faghmous, M Steinbach, A Banerjee, A Ganguly, ... IEEE Transactions on knowledge and data engineering 29 (10), 2318-2331, 2017 | 315 | 2017 |
| Impact of pretreated switchgrass and biomass carbohydrates on Clostridium thermocellum ATCC 27405 cellulosome composition: a quantitative proteomic analysis B Raman, C Pan, GB Hurst, M Rodriguez Jr, CK McKeown, PK Lankford, ... PloS one 4 (4), e5271, 2009 | 249 | 2009 |
| Anomaly detection in dynamic networks: a survey S Ranshous, S Shen, D Koutra, S Harenberg, C Faloutsos, NF Samatova Wiley Interdisciplinary Reviews: Computational Statistics 7 (3), 223-247, 2015 | 229 | 2015 |
| The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior JM McCollum, GD Peterson, CD Cox, ML Simpson, NF Samatova Computational biology and chemistry 30 (1), 39-49, 2006 | 221 | 2006 |
| Hello ADIOS: the challenges and lessons of developing leadership class I/O frameworks Q Liu, J Logan, Y Tian, H Abbasi, N Podhorszki, JY Choi, S Klasky, ... Concurrency and Computation: Practice and Experience 26 (7), 1453-1473, 2014 | 209 | 2014 |
| Community detection in large‐scale networks: a survey and empirical evaluation S Harenberg, G Bello, L Gjeltema, S Ranshous, J Harlalka, R Seay, ... Wiley Interdisciplinary Reviews: Computational Statistics 6 (6), 426-439, 2014 | 207 | 2014 |
| Compressing the incompressible with ISABELA: In-situ reduction of spatio-temporal data S Lakshminarasimhan, N Shah, S Ethier, S Klasky, R Latham, R Ross, ... European Conference on Parallel Processing, 366-379, 2011 | 186 | 2011 |
| From pull-down data to protein interaction networks and complexes with biological relevance B Zhang, BH Park, T Karpinets, NF Samatova Bioinformatics 24 (7), 979-986, 2008 | 163 | 2008 |
| A scalable, parallel algorithm for maximal clique enumeration MC Schmidt, NF Samatova, K Thomas, BH Park Journal of Parallel and Distributed Computing 69 (4), 417-428, 2009 | 156 | 2009 |
| Compressed ion temperature gradient turbulence in diverted tokamak edge CS Chang, S Ku, PH Diamond, Z Lin, S Parker, TS Hahm, N Samatova Physics of Plasmas 16 (5), 056108, 2009 | 118 | 2009 |
| Efficient data access for parallel BLAST H Lin, X Ma, P Chandramohan, A Geist, N Samatova 19th IEEE International Parallel and Distributed Processing Symposium, 10 pp., 2005 | 108 | 2005 |
| ProRata: a quantitative proteomics program for accurate protein abundance ratio estimation with confidence interval evaluation C Pan, G Kora, WH McDonald, DL Tabb, NC VerBerkmoes, GB Hurst, ... Analytical chemistry 78 (20), 7121-7131, 2006 | 107 | 2006 |
| Community-based anomaly detection in evolutionary networks Z Chen, W Hendrix, NF Samatova Journal of Intelligent Information Systems 39 (1), 59-85, 2012 | 100 | 2012 |
| Improved genome annotation for Zymomonas mobilis S Yang, KM Pappas, LJ Hauser, ML Land, GL Chen, GB Hurst, C Pan, ... Nature biotechnology 27 (10), 893-894, 2009 | 96 | 2009 |
| ISABELA-QA: query-driven analytics with ISABELA-compressed extreme-scale scientific data S Lakshminarasimhan, J Jenkins, I Arkatkar, Z Gong, H Kolla, SH Ku, ... Proceedings of 2011 International Conference for High Performance Computing …, 2011 | 94 | 2011 |
| Genome-scale computational approaches to memory-intensive applications in systems biology Y Zhang, FN Abu-Khzam, NE Baldwin, EJ Chesler, MA Langston, ... SC'05: Proceedings of the 2005 ACM/IEEE Conference on Supercomputing, 12-12, 2005 | 90 | 2005 |
| System for gathering and summarizing internet information TE Potok, MT Elmore, JW Reed, JN Treadwell, NF Samatova US Patent 7,072,883, 2006 | 88* | 2006 |
| RACHET: An efficient cover-based merging of clustering hierarchies from distributed datasets NF Samatova, G Ostrouchov, A Geist, AV Melechko Distributed and Parallel Databases 11 (2), 157-180, 2002 | 88 | 2002 |
Scott KlaskyOak Ridge National LaboratoryVerified email at ornl.gov
