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Lihua Julie Zhu
Lihua Julie Zhu
Professor and Head of Bioinformatics Core, MCCB, University of Massachusetts Medical School
Verified email at umassmed.edu - Homepage
Title
Cited by
Cited by
Year
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
LJ Zhu, C Gazin, ND Lawson, H Pagès, SM Lin, DS Lapointe, MR Green
BMC bioinformatics 11, 1-10, 2010
10582010
Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases
X Meng, MB Noyes, LJ Zhu, ND Lawson, SA Wolfe
Nature biotechnology 26 (6), 695-701, 2008
9432008
Therapeutic genome editing by combined viral and non-viral delivery of CRISPR system components in vivo
H Yin, CQ Song, JR Dorkin, LJ Zhu, Y Li, Q Wu, A Park, J Yang, S Suresh, ...
Nature biotechnology 34 (3), 328-333, 2016
9232016
Thioredoxin-interacting protein mediates ER stress-induced β cell death through initiation of the inflammasome
CM Oslowski, T Hara, B O'Sullivan-Murphy, K Kanekura, S Lu, M Hara, ...
Cell metabolism 16 (2), 265-273, 2012
6772012
Structure-guided chemical modification of guide RNA enables potent non-viral in vivo genome editing
H Yin, CQ Song, S Suresh, Q Wu, S Walsh, LH Rhym, E Mintzer, ...
Nature biotechnology 35 (12), 1179-1187, 2017
4632017
Genome Sequence and Analysis of the Oral Bacterium Fusobacterium nucleatum Strain ATCC 25586
V Kapatral, I Anderson, N Ivanova, G Reznik, T Los, A Lykidis, ...
Journal of bacteriology 184 (7), 2005-2018, 2002
4332002
Prominin2 drives ferroptosis resistance by stimulating iron export
CW Brown, JJ Amante, P Chhoy, AL Elaimy, H Liu, LJ Zhu, CE Baer, ...
Developmental cell 51 (5), 575-586. e4, 2019
3672019
Uncoupling lifespan and healthspan in Caenorhabditis elegans longevity mutants
A Bansal, LJ Zhu, K Yen, HA Tissenbaum
Proceedings of the National Academy of Sciences 112 (3), E277-E286, 2015
3532015
The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation
MA Umbarger, E Toro, MA Wright, GJ Porreca, D Bau, SH Hong, MJ Fero, ...
Molecular cell 44 (2), 252-264, 2011
2992011
Diet-induced developmental acceleration independent of TOR and insulin in C. elegans
LT MacNeil, E Watson, HE Arda, LJ Zhu, AJM Walhout
Cell 153 (1), 240-252, 2013
2962013
Annotating the human genome with Disease Ontology
JD Osborne, J Flatow, M Holko, SM Lin, WA Kibbe, L Zhu, MI Danila, ...
BMC genomics 10, 1-8, 2009
2952009
FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system
LJ Zhu, RG Christensen, M Kazemian, CJ Hull, MS Enuameh, ...
Nucleic acids research 39 (suppl_1), D111-D117, 2011
2392011
Partial DNA-guided Cas9 enables genome editing with reduced off-target activity
H Yin, CQ Song, S Suresh, SY Kwan, Q Wu, S Walsh, J Ding, RL Bogorad, ...
Nature chemical biology 14 (3), 311-316, 2018
2252018
CRISPRseek: a bioconductor package to identify target-specific guide RNAs for CRISPR-Cas9 genome-editing systems
LJ Zhu, BR Holmes, N Aronin, MH Brodsky
PloS one 9 (9), e108424, 2014
2172014
Tead and AP1 coordinate transcription and motility
X Liu, H Li, M Rajurkar, Q Li, JL Cotton, J Ou, LJ Zhu, HL Goel, ...
Cell reports 14 (5), 1169-1180, 2016
2162016
miR-221 is required for endothelial tip cell behaviors during vascular development
S Nicoli, CP Knyphausen, LJ Zhu, A Lakshmanan, ND Lawson
Developmental cell 22 (2), 418-429, 2012
1952012
A genome-wide RNA interference screen reveals an essential CREB3L2-ATF5-MCL1 survival pathway in malignant glioma with therapeutic implications
Z Sheng, L Li, LJ Zhu, TW Smith, A Demers, AH Ross, RP Moser, ...
Nature medicine 16 (6), 671-677, 2010
1892010
TRIM37 is a new histone H2A ubiquitin ligase and breast cancer oncoprotein
S Bhatnagar, C Gazin, L Chamberlain, J Ou, X Zhu, JS Tushir, ...
Nature 516 (7529), 116-120, 2014
1762014
ATACseqQC: a Bioconductor package for post-alignment quality assessment of ATAC-seq data
J Ou, H Liu, J Yu, MA Kelliher, LH Castilla, ND Lawson, LJ Zhu
BMC genomics 19, 1-13, 2018
1712018
DNA-binding-domain fusions enhance the targeting range and precision of Cas9
MF Bolukbasi, A Gupta, S Oikemus, AG Derr, M Garber, MH Brodsky, ...
Nature methods 12 (12), 1150-1156, 2015
1602015
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