Pavel Sumazin
TitleCited byYear
An extensive microRNA-mediated network of RNA-RNA interactions regulates established oncogenic pathways in glioblastoma
P Sumazin, X Yang, HS Chiu, WJ Chung, A Iyer, D Llobet-Navas, ...
Cell 147 (2), 370-381, 2011
5872011
Whole exome sequencing to identify a novel gene (caveolin-1) associated with human pulmonary arterial hypertension
ED Austin, L Ma, C LeDuc, E Berman Rosenzweig, A Borczuk, ...
Circulation: Cardiovascular Genetics 5 (3), 336-343, 2012
2942012
A human B‐cell interactome identifies MYB and FOXM1 as master regulators of proliferation in germinal centers
C Lefebvre, P Rajbhandari, MJ Alvarez, P Bandaru, WK Lim, M Sato, ...
Molecular systems biology 6 (1), 2010
2882010
tRNA-derived microRNA modulates proliferation and the DNA damage response and is down-regulated in B cell lymphoma
RL Maute, C Schneider, P Sumazin, A Holmes, A Califano, K Basso, ...
Proceedings of the National Academy of Sciences 110 (4), 1404-1409, 2013
2412013
Lowest common ancestors in trees and directed acyclic graphs
MA Bender, M Farach-Colton, G Pemmasani, S Skiena, P Sumazin
Journal of Algorithms 57 (2), 75-94, 2005
2172005
Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells
K Basso, M Saito, P Sumazin, AA Margolin, K Wang, WK Lim, Y Kitagawa, ...
Blood, The Journal of the American Society of Hematology 115 (5), 975-984, 2010
2042010
Identifying tissue-selective transcription factor binding sites in vertebrate promoters
AD Smith, P Sumazin, MQ Zhang
Proceedings of the National Academy of Sciences 102 (5), 1560-1565, 2005
1672005
Similarity of position frequency matrices for transcription factor binding sites
DE Schones, P Sumazin, MQ Zhang
Bioinformatics 21 (3), 307-313, 2005
1442005
Identification of the human mature B cell miRNome
K Basso, P Sumazin, P Morozov, C Schneider, RL Maute, Y Kitagawa, ...
Immunity 30 (5), 744-752, 2009
1432009
BCL6 suppression of BCL2 via Miz1 and its disruption in diffuse large B cell lymphoma
M Saito, U Novak, E Piovan, K Basso, P Sumazin, C Schneider, M Crespo, ...
Proceedings of the National Academy of Sciences 106 (27), 11294-11299, 2009
1402009
DNA motifs in human and mouse proximal promoters predict tissue-specific expression
AD Smith, P Sumazin, Z Xuan, MQ Zhang
Proceedings of the National Academy of Sciences 103 (16), 6275-6280, 2006
1322006
Mining ChIP-chip data for transcription factor and cofactor binding sites
AD Smith, P Sumazin, D Das, MQ Zhang
Bioinformatics 21 (suppl_1), i403-i412, 2005
1162005
A molecular signature predictive of indolent prostate cancer
S Irshad, M Bansal, M Castillo-Martin, T Zheng, A Aytes, S Wenske, ...
Science translational medicine 5 (202), 202ra122-202ra122, 2013
1152013
A comprehensive pan-cancer molecular study of gynecologic and breast cancers
AC Berger, A Korkut, RS Kanchi, AM Hegde, W Lenoir, W Liu, Y Liu, ...
Cancer cell 33 (4), 690-705. e9, 2018
982018
ChIP-on-chip significance analysis reveals large-scale binding and regulation by human transcription factor oncogenes
AA Margolin, T Palomero, P Sumazin, A Califano, AA Ferrando, ...
Proceedings of the National Academy of Sciences 106 (1), 244-249, 2009
862009
Pan-cancer analysis of lncRNA regulation supports their targeting of cancer genes in each tumor context
HS Chiu, S Somvanshi, E Patel, TW Chen, VP Singh, B Zorman, SL Patil, ...
Cell reports 23 (1), 297-312. e12, 2018
752018
Tissue‐specific regulatory elements in mammalian promoters
AD Smith, P Sumazin, MQ Zhang
Molecular systems biology 3 (1), 2007
702007
Recurrent internal tandem duplications of BCOR in clear cell sarcoma of the kidney
A Roy, V Kumar, B Zorman, E Fang, KM Haines, HV Doddapaneni, ...
Nature communications 6 (1), 1-7, 2015
682015
Cupid: simultaneous reconstruction of microRNA-target and ceRNA networks
HS Chiu, D Llobet-Navas, X Yang, WJ Chung, A Ambesi-Impiombato, ...
Genome research 25 (2), 257-267, 2015
652015
Trivalent CAR T cells overcome interpatient antigenic variability in glioblastoma
K Bielamowicz, K Fousek, TT Byrd, H Samaha, M Mukherjee, N Aware, ...
Neuro-oncology 20 (4), 506-518, 2018
622018
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