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Roger D. Kouyos
Roger D. Kouyos
University of Zurich; University Hospital Zurich
Verified email at uzh.ch
Title
Cited by
Cited by
Year
Population biological principles of drug-resistance evolution in infectious diseases
PA Zur Wiesch, R Kouyos, J Engelstädter, RR Regoes, S Bonhoeffer
The Lancet infectious diseases 11 (3), 236-247, 2011
2482011
Estimating the basic reproductive number from viral sequence data
T Stadler, R Kouyos, V von Wyl, S Yerly, J Böni, P Bürgisser, T Klimkait, ...
Molecular biology and evolution 29 (1), 347-357, 2012
1942012
Molecular epidemiology reveals long-term changes in HIV type 1 subtype B transmission in Switzerland
RD Kouyos, V Von Wyl, S Yerly, J Böni, P Taffé, C Shah, P Börgisser, ...
The Journal of infectious diseases 201 (10), 1488-1497, 2010
1912010
Contribution of a mutational bias in hepatitis C virus replication to the genetic barrier in the development of drug resistance
MH Powdrill, EP Tchesnokov, RA Kozak, RS Russell, R Martin, ...
Proceedings of the National Academy of Sciences 108 (51), 20509-20513, 2011
1702011
The state of affairs in the kingdom of the Red Queen
M Salathé, RD Kouyos, S Bonhoeffer
Trends in Ecology & Evolution 23 (8), 439-445, 2008
1702008
Epistasis between deleterious mutations and the evolution of recombination
RD Kouyos, OK Silander, S Bonhoeffer
Trends in ecology & evolution 22 (6), 308-315, 2007
1602007
Ambiguous nucleotide calls from population-based sequencing of HIV-1 are a marker for viral diversity and the age of infection
RD Kouyos, V von Wyl, S Yerly, J Böni, P Rieder, B Joos, P Taffé, C Shah, ...
Clinical infectious diseases 52 (4), 532-539, 2011
1492011
Determinants of HIV-1 broadly neutralizing antibody induction
P Rusert, RD Kouyos, C Kadelka, H Ebner, M Schanz, M Huber, DL Braun, ...
Nature medicine 22 (11), 1260-1267, 2016
1362016
Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load
S Alizon, V von Wyl, T Stadler, RD Kouyos, S Yerly, B Hirschel, J Böni, ...
PLoS pathogens 6 (9), e1001123, 2010
1282010
Low-frequency drug-resistant HIV-1 and risk of virological failure to first-line NNRTI-based ART: a multicohort European case–control study using centralized ultrasensitive 454 …
A Cozzi-Lepri, M Noguera-Julian, F Di Giallonardo, R Schuurman, ...
Journal of antimicrobial chemotherapy 70 (3), 930-940, 2015
1202015
Exploring the complexity of the HIV-1 fitness landscape
RD Kouyos, GE Leventhal, T Hinkley, M Haddad, JM Whitcomb, ...
PLoS genetics 8 (3), e1002551, 2012
1182012
Stochastic or deterministic: what is the effective population size of HIV-1?
RD Kouyos, CL Althaus, S Bonhoeffer
Trends in microbiology 14 (12), 507-511, 2006
1172006
Inferring epidemic contact structure from phylogenetic trees
GE Leventhal, R Kouyos, T Stadler, V Von Wyl, S Yerly, J Böni, C Cellerai, ...
PLoS computational biology 8 (3), e1002413, 2012
1092012
Frequency and spectrum of unexpected clinical manifestations of primary HIV-1 infection
DL Braun, RD Kouyos, B Balmer, C Grube, R Weber, HF Günthard
Clinical Infectious Diseases 61 (6), 1013-1021, 2015
1052015
Prolonged persistence of measles virus RNA is characteristic of primary infection dynamics
WHW Lin, RD Kouyos, RJ Adams, BT Grenfell, DE Griffin
Proceedings of the National Academy of Sciences 109 (37), 14989-14994, 2012
1022012
The path of least resistance: aggressive or moderate treatment?
RD Kouyos, CJE Metcalf, R Birger, EY Klein, P Abel zur Wiesch, ...
Proceedings of the Royal Society B: Biological Sciences 281 (1794), 20140566, 2014
912014
Treatment-naive individuals are the major source of transmitted HIV-1 drug resistance in men who have sex with men in the Swiss HIV Cohort Study
SM Drescher, V von Wyl, WL Yang, J Böni, S Yerly, C Shah, V Aubert, ...
Clinical infectious diseases 58 (2), 285-294, 2014
882014
The role of migration and domestic transmission in the spread of HIV-1 non-B subtypes in Switzerland
V von Wyl, RD Kouyos, S Yerly, J Böni, C Shah, P Bürgisser, T Klimkait, ...
Journal of infectious diseases 204 (7), 1095-1103, 2011
872011
Determinants of HIV-1 reservoir size and long-term dynamics during suppressive ART
N Bachmann, C von Siebenthal, V Vongrad, T Turk, K Neumann, ...
Nature communications 10 (1), 1-11, 2019
842019
Cycling empirical antibiotic therapy in hospitals: meta-analysis and models
P Abel zur Wiesch, R Kouyos, S Abel, W Viechtbauer, S Bonhoeffer
PLoS pathogens 10 (6), e1004225, 2014
842014
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