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762 * 2020 Longitudinal multi-omics of host–microbe dynamics in prediabetes W Zhou*, MR Sailani*, K Contrepois*, Y Zhou*, S Ahadi*, SR Leopold, ...
Nature 569 (7758), 663-671, 2019
445 2019 Ageing hallmarks exhibit organ-specific temporal signatures N Schaum*, B Lehallier*, O Hahn*, ..., TTM Consortium, ..., SR Quake, ...
Nature 583 (7817), 596-602, 2020
370 2020 Exploring patterns enriched in a dataset with contrastive principal component analysis A Abid*, MJ Zhang*, VK Bagaria, J Zou
Nature communications 9 (1), 1-7, 2018
184 * 2018 Determining sequencing depth in a single-cell RNA-seq experiment MJ Zhang*, V Ntranos*, D Tse
Nature communications 11 (1), 1-11, 2020
130 2020 Mouse aging cell atlas analysis reveals global and cell type-specific aging signatures MJ Zhang, AO Pisco, S Darmanis, J Zou
Elife 10, e62293, 2021
86 2021 Molecular hallmarks of heterochronic parabiosis at single-cell resolution R Pálovics, A Keller, N Schaum, W Tan, T Fehlmann, M Borja, F Kern, ...
Nature 603 (7900), 309-314, 2022
61 2022 Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data MJ Zhang, K Hou, KK Dey, S Sakaue, KA Jagadeesh, K Weinand, ...
Nature genetics 54 (10), 1572-1580, 2022
52 2022 Polymicrobial periodontal disease triggers a wide radius of effect and unique virome L Gao, M Kang, MJ Zhang, M Reza Sailani, R Kuraji, A Martinez, C Ye, ...
npj Biofilms and Microbiomes 6 (1), 10, 2020
45 2020 Medoids in almost-linear time via multi-armed bandits V Bagaria*, G Kamath*, V Ntranos*, M Zhang*, D Tse
International Conference on Artificial Intelligence and Statistics, 500-509, 2018
41 2018 Bandit-PAM: Almost Linear Time -Medoids Clustering via Multi-Armed Bandits M Tiwari, MJ Zhang, J Mayclin, S Thrun, C Piech, I Shomorony
Advances in Neural Information Processing Systems 33, 2020
37 2020 Fast and covariate-adaptive method amplifies detection power in large-scale multiple hypothesis testing MJ Zhang, F Xia, J Zou
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37 2019 Deep longitudinal multiomics profiling reveals two biological seasonal patterns in California MR Sailani, AA Metwally, W Zhou, SMSF Rose, S Ahadi, K Contrepois, ...
Nature communications 11 (1), 4933, 2020
33 2020 On the theoretical analysis of cross validation in compressive sensing J Zhang, L Chen, PT Boufounos, Y Gu
2014 IEEE International Conference on Acoustics, Speech and Signal …, 2014
29 * 2014 Adaptive monte carlo multiple testing via multi-armed bandits M Zhang, J Zou, D Tse
International Conference on Machine Learning, 7512-7522, 2019
23 2019 Neuralfdr: Learning discovery thresholds from hypothesis features F Xia*, MJ Zhang*, JY Zou, D Tse
Advances in Neural Information Processing Systems, 1541-1550, 2017
23 2017 A multi-dimensional integrative scoring framework for predicting functional variants in the human genome X Li, G Yung, H Zhou, R Sun, Z Li, K Hou, MJ Zhang, Y Liu, T Arapoglou, ...
The American Journal of Human Genetics 109 (3), 446-456, 2022
18 2022 Nisin probiotic prevents inflammatory bone loss while promoting reparative proliferation and a healthy microbiome L Gao, R Kuraji, MJ Zhang, A Martinez, A Radaic, P Kamarajan, C Le, ...
NPJ biofilms and microbiomes 8 (1), 45, 2022
16 2022 Mldemon: Deployment monitoring for machine learning systems T Ginart, MJ Zhang, J Zou
International Conference on Artificial Intelligence and Statistics, 3962-3997, 2022
16 2022 Germline genomic and phenomic landscape of clonal hematopoiesis in 323,112 individuals MM Uddin, Z Yu, JS Weinstock, T Nakao, A Niroula, SM Urbut, S Koyama, ...
medRxiv, 2022.07. 29.22278015, 2022
8 2022